CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G055800.1	Wheat	cytosol	36.87	49.6
TraesCS3B01G068300.1	Wheat	cytosol	37.26	48.33
TraesCS3D01G055700.1	Wheat	cytosol	35.58	47.36
EER92907	Sorghum	cytosol, plastid	9.02	40.62
GSMUA_Achr3P26860_001	Banana	cytosol	12.39	39.81
OQU93289	Sorghum	cytosol	8.82	39.56
EER92908	Sorghum	cytosol	8.42	37.61
EER92000	Sorghum	cytosol	7.93	33.2
KXG38989	Sorghum	cytosol	9.32	31.97
GSMUA_Achr7P03960_001	Banana	cytosol	12.09	31.61
KXG34068	Sorghum	endoplasmic reticulum	6.84	31.51
KXG21305	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	6.54	30.84
EES17713	Sorghum	endoplasmic reticulum, extracellular	6.94	30.57
EER92911	Sorghum	cytosol	8.92	29.9
EES17708	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	6.54	29.2
EES02961	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	6.24	28.38
EES12862	Sorghum	cytosol	6.24	27.51
EES05217	Sorghum	cytosol	6.05	27.23
EES15858	Sorghum	cytosol	5.85	26.7
EES03661	Sorghum	cytosol	5.65	26.64
EES15859	Sorghum	cytosol	5.85	26.58
EES15857	Sorghum	cytosol	5.55	25.45
KXG37119	Sorghum	cytosol	5.45	21.15
OQU89855	Sorghum	cytosol	27.06	7.97

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EntrezGene:8071035	UniProt:C5YKE1	ncoils:Coil	EnsemblPlants:EES13729	ProteinID:EES13729
ProteinID:EES13729.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	MetaCyc:PWY-4061	MetaCyc:PWY-6842	MetaCyc:PWY-7112	MetaCyc:PWY-7533
EnsemblPlantsGene:SORBI_3007G111700	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A87E09	RefSeq:XP_002444234.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:42061204..42066842

Molecular Weight (calculated)

110478.0 Da

IEP (calculated)

5.700

GRAVY (calculated)

-1.016

Length

1009 amino acids

Sequence
(BLAST)

0001: MAGLSTSAGP PVVNVYHEKS MILPDVSRVL TCLYEKNVKF ETFKASYKDI LSLQASRSVP VPFYDGPIFL QDSRAICRYI AETYEHQGYP FLLGKDVLER
0101: ASIEQWLRNE EHAFDPPSRA LFCHLAFPLK EEDDDYDDDI NREKRKLEEV LEVYEQRLGE TEFLAGNKFT LADLVHLPGT HHIITSERFA YLYDSRKNVQ
0201: RWWNTISARD SWHQVLMDMK AVEEEHRKEE LKKEQQQWQT EYLQPFSGRD IHISHRQQES TKSHTVLVPP PSTGTIITSI PSAPQEHETA SELKPSSSIQ
0301: RNEGGFFTTT EKHPPTRQRD PNTQKPPGSV QNTKSSFFQP SITTTTTKMD QRTDSDNPSQ KGASTPSKTG QRQAGALADT KRATEADQDR APSPAQKSGV
0401: QDVQKQAKAI PTEQKVSGTS PRQVESEEDT QDGTDGDERF STKRLRRMFN PDAQGSQDPT MQEEAPVIKD PSGVLNREKQ TTTVPANKIT SSPSTGTRAP
0501: YTPEAADERG DISPPKGVPY NDRATARPGY SQSIQQVPPT SNDKLAKQGA DIRTPQRASQ QTLADAKSSP ELMQGADPRA RIVSDEQTKK SSTMTERAPE
0601: ATRKASDSQG TSASVQKAIL DTYGKQAPAN QGEIPGIQDT GDRDTNKKSI VGKMATEPTS ETLGDKSTIA AMVDPSTALP APVRTQASVG QNASVDPSEG
0701: NLDENSKNKA AKSSPDDTRS KLLTSPGKLA PNPDTQNRAT SGQLSKPSPQ LSSLSDTMNE ETNIAETSQT SVVSPNRQPG GQAPRNTGVL SSVPPRVKPP
0801: EDNNKAYKEE AVEQVARDQS MAQLAENKKQ GDYAAPVTRI GKSKEEGSLA DASSYNMGQA QATTAEPSKL QIQSDQSKPQ ASKDGGKQTN ETANSPTLAT
0901: SEEVLPSNPE KSKQLQGDKS AITLQENVKQ GSEAAPLGSG AEQQRKKDLP TNADKNYEKS SEVISEEKIT SDTQQVKSRR NDSTSDTSIK PSQSEGNKDN
1001: LPESERRGT

Best Arabidopsis Sequence Match ( AT2G30870.1 )
(BLAST)

001: MVLTIYAPLF ASSKRAVVTL VEKGVSFETV NVDLMKGEQR QPEYLAIQPF GKIPVLVDGD YKIFESRAIM RYIAEKYRSQ GPDLLGKTIE ERGQVEQWLD
101: VEATSYHPPL LALTLNIVFA PLMGFPADEK VIKESEEKLA EVLDVYEAQL SKNEYLAGDF VSLADLAHLP FTEYLVGPIG KAHLIKDRKH VSAWWDKISS
201: RAAWKEVSAK YSLPV

Arabidopsis Description

GSTF10Glutathione S-transferase F10 [Source:UniProtKB/Swiss-Prot;Acc:P42761]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.