CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029801_P002	Maize	extracellular	81.97	81.69
TraesCS1A01G203900.1	Wheat	cytosol	66.33	76.47
TraesCS1D01G207400.1	Wheat	cytosol	65.65	76.28
TraesCS1B01G217700.1	Wheat	cytosol	67.01	75.77
HORVU1Hr1G052470.2	Barley	cytosol	65.65	74.23
Os10t0543800-00	Rice	extracellular	64.97	68.7
GSMUA_Achr1P02260_001	Banana	cytosol	45.92	61.09
GSMUA_Achr4P29630_001	Banana	cytosol	45.92	61.09
Zm00001d029799_P002	Maize	cytosol	52.38	56.2
EER92911	Sorghum	cytosol	56.8	55.48
OQU93289	Sorghum	cytosol	34.01	44.44
EER92907	Sorghum	cytosol, plastid	33.33	43.75
EER92908	Sorghum	cytosol	31.97	41.59
EER92000	Sorghum	cytosol	32.99	40.25
KXG34068	Sorghum	endoplasmic reticulum	25.85	34.7
EES05217	Sorghum	cytosol	25.51	33.48
EES17713	Sorghum	endoplasmic reticulum, extracellular	25.85	33.19
EES15857	Sorghum	cytosol	24.49	32.73
EES12862	Sorghum	cytosol	24.83	31.88
EES15859	Sorghum	cytosol	22.79	30.18
KXG21305	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.77	29.91
EES02961	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.11	29.28
EES15858	Sorghum	cytosol	21.77	28.96
EES17708	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.77	28.32
EES03661	Sorghum	cytosol	19.39	26.64
KXG37119	Sorghum	cytosol	20.75	23.46
EES13729	Sorghum	cytosol	31.97	9.32
OQU89855	Sorghum	cytosol	32.31	2.77

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.5	Gene3D:3.40.30.10	UniProt:A0A1B6QM42	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	EnsemblPlants:KXG38989	ProteinID:KXG38989	ProteinID:KXG38989.1	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF11	EnsemblPlantsGene:SORBI_3001G310300	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00081AB845	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:59685977..59687345

Molecular Weight (calculated)

33026.6 Da

IEP (calculated)

9.512

GRAVY (calculated)

-0.480

Length

294 amino acids

Sequence
(BLAST)

001: MRIYISHPEQ PNLHTTSATP NTGCLLLLAK AFAAAAADRS HREKKMPVKV FGSPTSAEVA RVLACLFEKD VEFQLIRVDS FRGPKRLPQY LKLQPHGEAL
101: TFEDGNVTLV ESRKILRHIA EKYKNQGYRE LFGPGALERA SIEQWLQTEA QSFDIPSADM VYSLAYLPPD MPLDGGRGGL PAAAGAGAGG MNPTHRQKME
201: EMLQLFDKSR KELSKLLDIY EQRLGEEDFL AGTKFTLADL SHLPNADRLA ADPRSARLIR SRRNVSKWWD TISRRDSWVR VKELQRPPSA EAPF

Best Arabidopsis Sequence Match ( AT2G30870.1 )
(BLAST)

001: MVLTIYAPLF ASSKRAVVTL VEKGVSFETV NVDLMKGEQR QPEYLAIQPF GKIPVLVDGD YKIFESRAIM RYIAEKYRSQ GPDLLGKTIE ERGQVEQWLD
101: VEATSYHPPL LALTLNIVFA PLMGFPADEK VIKESEEKLA EVLDVYEAQL SKNEYLAGDF VSLADLAHLP FTEYLVGPIG KAHLIKDRKH VSAWWDKISS
201: RAAWKEVSAK YSLPV

Arabidopsis Description

GSTF10Glutathione S-transferase F10 [Source:UniProtKB/Swiss-Prot;Acc:P42761]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.