Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
nucleus:
19621931
extracellular: 26072143 plasma membrane: 27800704 extracellular: 28232208 |
msms PMID:
26072143
doi
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G207400.1 | Wheat | cytosol | 74.1 | 81.42 |
TraesCS1A01G203900.1 | Wheat | cytosol | 74.46 | 81.18 |
TraesCS1B01G217700.1 | Wheat | cytosol | 75.18 | 80.38 |
HORVU1Hr1G052470.2 | Barley | cytosol | 74.46 | 79.62 |
Zm00001d029801_P002 | Maize | extracellular | 69.78 | 65.76 |
KXG38989 | Sorghum | cytosol | 68.7 | 64.97 |
GSMUA_Achr1P02260_001 | Banana | cytosol | 47.48 | 59.73 |
GSMUA_Achr4P29630_001 | Banana | cytosol | 47.12 | 59.28 |
Zm00001d029799_P002 | Maize | cytosol | 50.36 | 51.09 |
Os03t0135200-01 | Rice | cytosol, plasma membrane | 20.14 | 43.41 |
Os03t0135100-01 | Rice | extracellular | 34.53 | 42.67 |
Os03t0135300-01 | Rice | plastid | 34.17 | 42.41 |
Os05t0148900-01 | Rice | extracellular | 23.74 | 33.17 |
Os01t0371200-01 | Rice | plasma membrane | 25.9 | 32.88 |
Os01t0374000-01 | Rice | cytosol | 25.18 | 32.71 |
Os01t0933900-01 | Rice | mitochondrion | 25.9 | 32.58 |
Os01t0371400-00 | Rice | cytosol | 23.02 | 32.16 |
Os01t0371500-01 | Rice | cytosol | 24.46 | 31.48 |
Os01t0764000-01 | Rice | cytosol | 24.1 | 31.16 |
Os01t0370200-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 24.1 | 30.73 |
Os01t0372400-01 | Rice | cytosol | 24.1 | 30.32 |
Os01t0369700-03 | Rice | cytosol | 24.82 | 28.75 |
Os01t0353400-00 | Rice | cytosol | 21.58 | 27.65 |
Os01t0370900-00 | Rice | mitochondrion | 18.35 | 20.56 |
Os03t0134900-01 | Rice | extracellular | 11.15 | 9.72 |
Os09t0544400-00 | Rice | extracellular, plasma membrane, plastid | 32.73 | 3.53 |
Os08t0550500-01 | Rice | extracellular | 1.08 | 0.62 |
Protein Annotations
Gene3D:1.20.1050.10 | MapMan:18.8.1.5 | Gene3D:3.40.30.10 | EntrezGene:4349270 | ProteinID:AAG13595.1 | ProteinID:AAP54871.1 |
EMBL:AB103350 | ProteinID:BAF27113.1 | ProteinID:BAT11886.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004364 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0006749 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016740 |
InterPro:GST_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 |
EnsemblPlantsGene:Os10g0543800 | EnsemblPlants:Os10t0543800-00 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 |
PANTHER:PTHR43900 | PANTHER:PTHR43900:SF11 | UniProt:Q7XCK0 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
UniParc:UPI00000A9CAF | RefSeq:XP_015613408.1 | SEG:seg | : | : | : |
Description
PHLOEM PROTEIN 31Similar to Glutathione S-transferase GST 11 (EC 2.5.1.18). (Os10t0543800-00)
Coordinates
chr10:-:21231593..21233093
Molecular Weight (calculated)
30846.3 Da
IEP (calculated)
6.955
GRAVY (calculated)
-0.668
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGAVKVFGS PSSAEVARVL ACLFEKDVEF QLIRVDSFRG SKRMPQYLKL QPHGEALTFE DGNVTLVESR KIIRHIADKY KNQGNPDLIG MGALERSSIE
101: QWLQTEAQSF DVPSADVVYS LAYLPAATTQ PNKGAAAADG GRCEEEKNDD GGRDRQYSSQ RQGGAGAGGG RDGQMAAAHR QKVEEMKQLF EKSSKELSKV
201: LDIYEQRLEE AEYLAGDKFT LADLSHLPNA DRLAADPRTL RMLQSRRNVS RWWADVSGRE SWKQVKSLNR PPSAEAPF
101: QWLQTEAQSF DVPSADVVYS LAYLPAATTQ PNKGAAAADG GRCEEEKNDD GGRDRQYSSQ RQGGAGAGGG RDGQMAAAHR QKVEEMKQLF EKSSKELSKV
201: LDIYEQRLEE AEYLAGDKFT LADLSHLPNA DRLAADPRTL RMLQSRRNVS RWWADVSGRE SWKQVKSLNR PPSAEAPF
001: MVLKVYGPHF ASPKRALVTL IEKGVAFETI PVDLMKGEHK QPAYLALQPF GTVPAVVDGD YKIFESRAVM RYVAEKYRSQ GPDLLGKTVE DRGQVEQWLD
101: VEATTYHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA GVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETVAK YSFPA
101: VEATTYHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA GVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETVAK YSFPA
Arabidopsis Description
GSTF9GSTF9 [Source:UniProtKB/TrEMBL;Acc:A0A178VP05]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.