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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 4
  • mitochondrion 2
  • cytosol 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
 extracellular: 18372294
msms PMID: 18372294 doi
T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0134900-01 Rice extracellular 1.04 1.57
Os10t0543800-00 Rice extracellular 0.62 1.08
Os01t0933900-01 Rice mitochondrion 0.41 0.9
Os01t0369700-03 Rice cytosol 0.41 0.83
Os09t0544400-00 Rice extracellular, plasma membrane, plastid 2.48 0.47
Os01t0353400-00 Rice cytosol 0.21 0.46
Os01t0371200-01 Rice plasma membrane 0.0 0.0
Os01t0371400-00 Rice cytosol 0.0 0.0
Os01t0371500-01 Rice cytosol 0.0 0.0
Os01t0372400-01 Rice cytosol 0.0 0.0
Os01t0374000-01 Rice cytosol 0.0 0.0
Os01t0764000-01 Rice cytosol 0.0 0.0
Os01t0370900-00 Rice mitochondrion 0.0 0.0
Os01t0370200-00 Rice cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 0.0 0.0
Os03t0135100-01 Rice extracellular 0.0 0.0
Os03t0135200-01 Rice cytosol, plasma membrane 0.0 0.0
Os03t0135300-01 Rice plastid 0.0 0.0
Os05t0148900-01 Rice extracellular 0.0 0.0
Protein Annotations
EnsemblPlants:Os08t0550500-01EnsemblPlantsGene:Os08g0550500GO:GO:0003674GO:GO:0003824GO:GO:0016740ProteinID:BAD08964.1
ProteinID:BAD10194.1ProteinID:BAF24361.1ProteinID:BAT06584.1SEG:segUniParc:UPI000023AC91UniProt:Q6Z3I3
MapMan:35.2:::::
Description
Similar to Glutathione s-transferase (Fragment). (Os08t0550500-01)
Coordinates
chr8:+:27612534..27614930
Molecular Weight (calculated)
51033.0 Da
IEP (calculated)
9.401
GRAVY (calculated)
-1.178
Length
483 amino acids
Sequence
(BLAST)
001: MTPRQAAPSV TQRASASIQE RISGARGASD DMFGKTSSAD QSNTPAIPKQ TTVQGATPDV RGTSYADREM KLPADEKATA NKQKPVSSSQ QTIEPIRGGT
101: PTSYGSTDDD LAKTSRANER QTPPSKAQAP ASNRQSASTA LQGGTPDARG ENTAVKPSVT SPTGMPTSSR RQEPTPSVTS PTGVPTSPRR QEPTPDTQRR
201: RAADQMPSQA PLPSSFSTRN KENGISEAGQ TNTVAPDGLP GPGVPKDAGP QVAGPSVVKS QKNMNEAYND GPSTQQLPND QYRSQPREAK EEQGADAALI
301: NEIGKAQKDD LLANPNQSST GRVQPTSTEE TSKQQLQSGL NKPISSKDGK ETVSYGSSAT SREMLPSIPD KSMRVQQPQG DKSSYSSISQ EDNVKQGSQA
401: ALQGSGNEQP KKRDLLANAD EKIRGTTGEA LQKSDEGRIS SNTEQMKSNR NNSKPDGSTE PTSFDGNEGN LPESQRRGSS SNP
Best Arabidopsis Sequence Match ( AT1G28630.2 )
(BLAST)
001: MDLVDDMLPF TPSWFPPSPE PFPSIMELLQ DPMTAEIENF DGIFSSPAIS EAIPSTNTQP SVFPCPESST IPQISPDMQQ QEPLDDSHGY LQQSDQQDLL
101: NPNMLNCYQE PDVSTIQQQQ LNLPGPLEQS DLQRLLNPNM MYSEPDFSTS LQQPPPLYDS HGYLQQSDQQ DLMNQNMMNS FQGANVSTTQ QQQLLCNSHG
201: HVQGNLSNIQ SDQQYLSNQN ATDLFQEPNN STMIDIGQQI EEGNNGYAHQ PLIDPFELPN HHQEQFPSVP ISQNYPSYPV YQHGPVGSHF NMYGQQPPPL
301: VLTNREEEHL PPRNVTDLAR
Arabidopsis Description
unknown protein; Has 647 Blast hits to 524 proteins in 85 species: Archae - 0; Bacteria - 6; Metazoa - 100; Fungi - 44; Plants - 83; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink). [Source:TAIR;Acc:AT1G28630]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.