Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 2
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042216_P001 Maize extracellular, plasma membrane 89.95 89.14
HORVU3Hr1G097950.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 70.78 72.43
Os01t0933900-01 Rice mitochondrion 73.06 72.4
TraesCS3D01G445400.1 Wheat golgi 69.86 71.83
TraesCS3A01G452900.1 Wheat golgi 69.86 71.83
TraesCS3B01G490600.3 Wheat golgi 70.78 67.69
GSMUA_Achr11P... Banana unclear 58.9 62.62
HORVU3Hr1G097900.3 Barley cytosol 61.64 60.54
TraesCS3B01G490400.1 Wheat cytosol 61.19 59.82
TraesCS3A01G452800.1 Wheat cytosol 59.82 59.55
TraesCS3D01G445300.1 Wheat cytosol 60.27 59.19
HORVU3Hr1G097870.1 Barley plastid 60.27 49.81
EES03661 Sorghum cytosol 46.12 47.2
EES12862 Sorghum cytosol 45.66 43.67
EES05217 Sorghum cytosol 43.38 42.41
EES15857 Sorghum cytosol 42.47 42.27
EER92907 Sorghum cytosol, plastid 41.1 40.18
EES02961 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 40.18 39.64
KXG21305 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 38.36 39.25
KXG37119 Sorghum cytosol 46.58 39.23
EES15859 Sorghum cytosol 39.73 39.19
EES17713 Sorghum endoplasmic reticulum, extracellular 40.64 38.86
EES17708 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 39.73 38.5
EES15858 Sorghum cytosol 38.81 38.46
EER92908 Sorghum cytosol 37.44 36.28
OQU93289 Sorghum cytosol 36.07 35.11
EER92000 Sorghum cytosol 33.79 30.71
KXG38989 Sorghum cytosol 34.7 25.85
EER92911 Sorghum cytosol 31.05 22.59
EES13729 Sorghum cytosol 31.51 6.84
OQU89855 Sorghum cytosol 32.42 2.07
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10UniProt:A0A1B6Q818GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:GST_C
InterPro:GST_Phi_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987
EnsemblPlants:KXG34068ProteinID:KXG34068ProteinID:KXG34068.1PFAM:PF00043PFAM:PF02798PFscan:PS50404
PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF19MetaCyc:PWY-4061MetaCyc:PWY-6842MetaCyc:PWY-7112
MetaCyc:PWY-7533EnsemblPlantsGene:SORBI_3003G416300SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI000189D49E
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:-:72250841..72252382
Molecular Weight (calculated)
23991.8 Da
IEP (calculated)
6.514
GRAVY (calculated)
0.010
Length
219 amino acids
Sequence
(BLAST)
001: MAPLKLYGMP LSPNVVRVAT VLNEKGLEFE IIPVDLTTGA HKQPDFLALN PFGQIPALVD GDEVLYESRA INRYIATKYA SSGAALLPAT ASAKLEVWLE
101: VESHHFYPNA SPLVFQLLFR PLFGGAPDPL VVDKHAHELA KVLDVYEAHL ASNKYLAGDE FTLADANHAS YLLYLTKTPK AGLVNDRPHV KAWWEEIAKR
201: PAFQKTVAAI PFPPPPSSA
Best Arabidopsis Sequence Match ( AT3G62760.1 )
(BLAST)
001: MAMKLYGDEM SACVARVLLC LHEKNTEFEL VPVNLFACHH KLPSFLSMNP FGKVPALQDD DLTLFESRAI TAYIAEKHRD KGTDLTRHED PKEAAIVKLW
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN
Arabidopsis Description
GSTF13Glutathione S-transferase F13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.