Factsheet for Zm00001d042216_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

extracellular: 20408568
plasma membrane: 23353019
mitochondrion: 27297264

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34068	Sorghum	endoplasmic reticulum	89.14	89.95
HORVU3Hr1G097950.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	72.85	75.23
TraesCS3A01G452900.1	Wheat	golgi	71.95	74.65
Os01t0933900-01	Rice	mitochondrion	74.21	74.21
TraesCS3D01G445400.1	Wheat	golgi	71.49	74.18
TraesCS3B01G490600.3	Wheat	golgi	72.85	70.31
TraesCS3B01G490400.1	Wheat	cytosol	65.61	64.73
HORVU3Hr1G097900.3	Barley	cytosol	65.16	64.57
TraesCS3A01G452800.1	Wheat	cytosol	64.25	64.55
TraesCS3D01G445300.1	Wheat	cytosol	64.25	63.68
GSMUA_Achr11P...	Banana	unclear	58.82	63.11
HORVU3Hr1G097870.1	Barley	plastid	63.8	53.21
Zm00001d012675_P001	Maize	plastid	47.96	49.53
Zm00001d024839_P001	Maize	extracellular	42.99	42.6
Zm00001d043344_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.53	41.96
Zm00001d010870_P001	Maize	extracellular	42.53	40.17
Zm00001d027542_P001	Maize	endoplasmic reticulum	40.72	37.66
Zm00001d027541_P001	Maize	extracellular	37.56	36.73
Zm00001d048354_P001	Maize	extracellular	36.65	35.84
Zm00001d027540_P001	Maize	nucleus	34.84	34.22
Zm00001d048353_P001	Maize	extracellular	34.39	33.78
Zm00001d029801_P002	Maize	extracellular	32.13	24.07
Zm00001d021470_P001	Maize	cytosol	32.58	24.0
Zm00001d027539_P001	Maize	extracellular, mitochondrion, plastid	29.86	21.64
Zm00001d029799_P002	Maize	cytosol	24.43	19.71
Zm00001d021469_P002	Maize	cytosol	33.03	2.6

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EntrezGene:541990	UniProt:B4FK84	EMBL:BT037522	EMBL:BT039262	EMBL:BT039985
EMBL:BT041458	EMBL:BT062456	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006950	GO:GO:0008144	GO:GO:0008150	GO:GO:0009635
GO:GO:0016740	GO:GO:0032991	GO:GO:0042803	GO:GO:0043234	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	ProteinID:ONM34821.1
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF19
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0000602965	EnsemblPlantsGene:Zm00001d042216	EnsemblPlants:Zm00001d042216_P001
EnsemblPlants:Zm00001d042216_T001	SEG:seg	:	:	:	:

Description

glutathione S-transferase4Glutathione S-transferase 3

Coordinates

chr3:+:156422305..156423867

Molecular Weight (calculated)

23895.8 Da

IEP (calculated)

6.397

GRAVY (calculated)

0.095

Length

221 amino acids

Sequence
(BLAST)

001: MAPLKLYGMP LSPNVVRVAT VLNEKGLDFE IVPVDLTTGA HKQPDFLALN PFGQIPALVD GDEVLFESRA INRYIASKYA SEGTDLLPAT ASAAKLEVWL
101: EVESHHFYPN ASPLVFQLLV RPLLGGAPDA AVVDKHAEQL AKVLDVYEAH LARNKYLAGD EFTLADANHA SYLLYLSKTP KAGLVAARPH VKAWWEAIVA
201: RPAFQKTVAA IPLPPPPSSS A

Best Arabidopsis Sequence Match ( AT3G62760.1 )
(BLAST)

001: MAMKLYGDEM SACVARVLLC LHEKNTEFEL VPVNLFACHH KLPSFLSMNP FGKVPALQDD DLTLFESRAI TAYIAEKHRD KGTDLTRHED PKEAAIVKLW
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN

Arabidopsis Description

GSTF13Glutathione S-transferase F13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.