Factsheet for Zm00001d048354_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92908	Sorghum	cytosol	96.02	96.02
Zm00001d027541_P001	Maize	extracellular	94.25	94.25
HORVU4Hr1G081110.1	Barley	cytosol	79.2	80.27
TraesCS4D01G327900.1	Wheat	cytosol	78.32	79.37
TraesCS5A01G502400.1	Wheat	cytosol	77.88	78.92
Zm00001d027540_P001	Maize	nucleus	76.11	76.44
Zm00001d048353_P001	Maize	extracellular	75.66	76.0
TraesCS4B01G331000.1	Wheat	cytosol, plastid	78.32	71.66
GSMUA_Achr1P02270_001	Banana	cytosol	60.18	59.13
Zm00001d027542_P001	Maize	endoplasmic reticulum	45.58	43.1
Zm00001d042216_P001	Maize	extracellular, plasma membrane	35.84	36.65
Zm00001d024839_P001	Maize	extracellular	34.07	34.53
Zm00001d012675_P001	Maize	plastid	31.42	33.18
Zm00001d029801_P002	Maize	extracellular	42.92	32.88
Zm00001d010870_P001	Maize	extracellular	33.63	32.48
Zm00001d043344_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.42	31.7
Zm00001d027539_P001	Maize	extracellular, mitochondrion, plastid	42.48	31.48
Zm00001d021470_P001	Maize	cytosol	40.71	30.67
Zm00001d029799_P002	Maize	cytosol	33.19	27.37
Zm00001d021469_P002	Maize	cytosol	40.27	3.24

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EntrezGene:542629	EMBL:AF244674	ProteinID:AQL09479.1	EMBL:EU965622	GO:GO:0003674
GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0016740	InterPro:GST_C
InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF00043	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF16
UniProt:Q9FQD0	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00000AA4B9	EnsemblPlantsGene:Zm00001d048354
EnsemblPlants:Zm00001d048354_P001	EnsemblPlants:Zm00001d048354_T001	:	:	:	:

Description

Glutathione S-transferase F9

Coordinates

chr9:-:154871684..154872915

Molecular Weight (calculated)

25878.9 Da

IEP (calculated)

8.460

GRAVY (calculated)

-0.457

Length

226 amino acids

Sequence
(BLAST)

001: MAAGLQVFGQ PASTDVARVL TCLFEKKLEF ELVRIDTFKT HHRLPEFIRL RDPNGQVTFK HGDKTLVDSR DICRYVCNQF PNYGNKSLYG SGALERASIE
101: QWLQAEAQNF GPPSSALVFQ LAFVPHLSHL GVRQDPAVIA ENEDKLKQVL DVYDEILSKN EYLAGDEFTL ADLSHLPNSH YIVNTERGRK LFTNKKNVAK
201: WYDRLSKRET WVQVVKMQKE HPGAFK

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.