Factsheet for Zm00001d027541_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92908	Sorghum	cytosol	94.69	94.69
Zm00001d048354_P001	Maize	extracellular	94.25	94.25
HORVU4Hr1G081110.1	Barley	cytosol	77.88	78.92
TraesCS4D01G327900.1	Wheat	cytosol	77.88	78.92
TraesCS5A01G502400.1	Wheat	cytosol	77.88	78.92
Zm00001d027540_P001	Maize	nucleus	76.11	76.44
Zm00001d048353_P001	Maize	extracellular	75.66	76.0
TraesCS4B01G331000.1	Wheat	cytosol, plastid	77.88	71.26
GSMUA_Achr1P02270_001	Banana	cytosol	59.29	58.26
Zm00001d027542_P001	Maize	endoplasmic reticulum	45.13	42.68
Zm00001d042216_P001	Maize	extracellular, plasma membrane	36.73	37.56
Zm00001d024839_P001	Maize	extracellular	34.51	34.98
Zm00001d010870_P001	Maize	extracellular	34.96	33.76
Zm00001d012675_P001	Maize	plastid	31.86	33.64
Zm00001d029801_P002	Maize	extracellular	40.71	31.19
Zm00001d027539_P001	Maize	extracellular, mitochondrion, plastid	41.59	30.82
Zm00001d043344_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.09	30.36
Zm00001d021470_P001	Maize	cytosol	40.27	30.33
Zm00001d029799_P002	Maize	cytosol	30.97	25.55
Zm00001d021469_P002	Maize	cytosol	39.82	3.21

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:100282447
MapMan:18.8.1.5	Gene3D:3.40.30.10	UniProt:B6T7H0	EMBL:EU960935	EMBL:EU973521	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	ProteinID:ONL93403.1
PFAM:PF00043	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF16
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000182C875	EnsemblPlantsGene:Zm00001d027541	EnsemblPlants:Zm00001d027541_P001
EnsemblPlants:Zm00001d027541_T001	:	:	:	:	:

Description

glutathione transferase9Glutathione S-transferase 6

Coordinates

chr1:-:7882159..7883359

Molecular Weight (calculated)

25787.7 Da

IEP (calculated)

7.664

GRAVY (calculated)

-0.503

Length

226 amino acids

Sequence
(BLAST)

001: MAAGLQVFGQ PASTDVSRVL TCLFEKKLEF DLVRIDTFKT HHKLPEFIRL RDPNGQVTLK HGDKTLVDSR DICRYVCTQF PNDGNKSLYG SGALERASIE
101: QWLQAEAQNF GPPSSALVFQ LAFVPHLTHL GVRQDPAVIA ENEDKLKQVL DVYDEILSRN EYLAGDEFTL ADLSHLPNSH YIVNTERGRK LFTNKKNVAK
201: WYEKLSKRET WKQVAKMQKE HPGAFE

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.