Factsheet for Zm00001d027542_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92907	Sorghum	cytosol, plastid	90.38	96.43
Os03t0135300-01	Rice	plastid	79.5	84.82
TraesCS4B01G331100.1	Wheat	endoplasmic reticulum, peroxisome	78.24	82.74
TraesCS4D01G328000.1	Wheat	peroxisome	78.24	82.74
TraesCS5A01G502500.1	Wheat	endoplasmic reticulum, peroxisome	77.82	82.3
HORVU4Hr1G081100.1	Barley	endoplasmic reticulum	77.82	73.81
GSMUA_Achr2P11180_001	Banana	cytosol	58.16	62.61
GSMUA_Achr5P17880_001	Banana	cytosol	57.74	62.44
PGSC0003DMT400075626	Potato	cytosol	55.23	59.73
VIT_18s0001g00690.t01	Wine grape	cytosol	55.65	59.64
Solyc12g094430.1.1	Tomato	plastid	54.81	59.28
Zm00001d048353_P001	Maize	extracellular	43.51	46.22
Zm00001d027540_P001	Maize	nucleus	43.51	46.22
Zm00001d048354_P001	Maize	extracellular	43.1	45.58
Zm00001d027541_P001	Maize	extracellular	42.68	45.13
Zm00001d042216_P001	Maize	extracellular, plasma membrane	37.66	40.72
Zm00001d012675_P001	Maize	plastid	33.47	37.38
Zm00001d024839_P001	Maize	extracellular	32.64	34.98
Zm00001d029801_P002	Maize	extracellular	41.42	33.56
Zm00001d010870_P001	Maize	extracellular	32.64	33.33
Zm00001d027539_P001	Maize	extracellular, mitochondrion, plastid	41.42	32.46
Zm00001d043344_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.29	31.25
Zm00001d029799_P002	Maize	cytosol	35.56	31.02
Zm00001d021470_P001	Maize	cytosol	38.91	31.0
Zm00001d021469_P002	Maize	cytosol	38.08	3.24

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EntrezGene:541828	UniProt:A0A1D6JMY2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	ProteinID:ONL93404.1	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0008447CA4	EnsemblPlantsGene:Zm00001d027542	EnsemblPlants:Zm00001d027542_P001	EnsemblPlants:Zm00001d027542_T001	:	:

Description

glutathione transferase10 glutathione transferase10

Coordinates

chr1:-:7885525..7886727

Molecular Weight (calculated)

26638.7 Da

IEP (calculated)

6.272

GRAVY (calculated)

-0.219

Length

239 amino acids

Sequence
(BLAST)

001: MAAPVTVYGP MLSPAVARVA ACLLEKDVPF QIEPVDMSKG EHKSPSFLKL QPFGQVPAFK DHLTTVFGTS TSQFFYYYCY ISKSRAICRY ICDQYADSGN
101: QALFGKKEDG AVGRAAIEQW IESEGQSFNP PSLAIIFQLA FAPMMGRTTD LAVVEQNEAK LAKVLDVYDQ RLGESQYFAG DDFSLADLVH LPNADFLVNR
201: TSKAGLITER KNLARWWDDV SSRPAWKKVT EMQSTPRPS

Best Arabidopsis Sequence Match ( AT3G03190.1 )
(BLAST)

001: MVVKVYGQIK AANPQRVLLC FLEKDIEFEV IHVDLDKLEQ KKPQHLLRQP FGQVPAIEDG YLKLFESRAI ARYYATKYAD QGTDLLGKTL EGRAIVDQWV
101: EVENNYFYAV ALPLVMNVVF KPKSGKPCDV ALVEELKVKF DKVLDVYENR LATNRYLGGD EFTLADLSHM PGMRYIMNET SLSGLVTSRE NLNRWWNEIS
201: ARPAWKKLME LAAY

Arabidopsis Description

GSTF11Glutathione S-transferase F11 [Source:UniProtKB/Swiss-Prot;Acc:Q96324]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.