Factsheet for Zm00001d027539_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

extracellular: 20408568
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92911	Sorghum	cytosol	88.52	89.7
TraesCS4D01G327700.1	Wheat	cytosol, nucleus, peroxisome	66.23	62.54
TraesCS4B01G330800.1	Wheat	cytosol, nucleus, peroxisome	66.56	62.46
GSMUA_Achr1P02260_001	Banana	cytosol	44.92	61.99
GSMUA_Achr4P29630_001	Banana	cytosol	44.59	61.54
Zm00001d029801_P002	Maize	extracellular	54.1	55.93
HORVU4Hr1G081170.1	Barley	cytosol, peroxisome, plastid	64.92	50.13
Zm00001d029799_P002	Maize	cytosol	41.64	46.35
Os03t0135200-01	Rice	cytosol, plasma membrane	19.34	45.74
Zm00001d048353_P001	Maize	extracellular	32.79	44.44
Zm00001d027540_P001	Maize	nucleus	32.79	44.44
Zm00001d048354_P001	Maize	extracellular	31.48	42.48
Zm00001d027541_P001	Maize	extracellular	30.82	41.59
Zm00001d027542_P001	Maize	endoplasmic reticulum	32.46	41.42
Zm00001d042216_P001	Maize	extracellular, plasma membrane	21.64	29.86
Zm00001d024839_P001	Maize	extracellular	21.64	29.6
Zm00001d021470_P001	Maize	cytosol	27.87	28.33
Zm00001d010870_P001	Maize	extracellular	21.64	28.21
Zm00001d012675_P001	Maize	plastid	18.03	25.7
Zm00001d043344_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.69	25.45
Os03t0134900-01	Rice	extracellular	13.44	12.85
Zm00001d021469_P002	Maize	cytosol	27.87	3.03

Protein Annotations

Gene3D:1.20.1050.10	Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:541829	UniProt:B4FV03	EMBL:BT040941
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	ProteinID:ONL93398.1	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF8	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00017B809F	EnsemblPlantsGene:Zm00001d027539	EnsemblPlants:Zm00001d027539_P001	EnsemblPlants:Zm00001d027539_T001

Description

glutathione transferase11 glutathione transferase11

Coordinates

chr1:-:7844326..7845737

Molecular Weight (calculated)

34119.1 Da

IEP (calculated)

8.420

GRAVY (calculated)

-0.672

Length

305 amino acids

Sequence
(BLAST)

001: MASVKVFGSP TSAEVARVLM CLFEKEVEFQ LIRVDAYRGT KRMPQYLKLQ PQGEALTFED ESLTLSDSRG ILRHISHKYA KQGNPYLIGT GALERASIEQ
101: WLQTEAQSFD APSAEMVYSL AFLPPTLPKQ NDNGNGGAFN ARDATVGSNA DASSGKRGVA GSQPAASQTK VSAQKEEEML KLFEQRKKDL EKLLDIYEQR
201: LEEATFLAGD NFTIADLSHL PYADHLVSDP RSRRMFESRK NVSRWWHDVS GRDTWKYVKT LQRPPSTSTD ASAKNGQLGQ QQHLPSSTDG HGVKTQRLVQ
301: NERHF

Best Arabidopsis Sequence Match ( AT3G03190.1 )
(BLAST)

001: MVVKVYGQIK AANPQRVLLC FLEKDIEFEV IHVDLDKLEQ KKPQHLLRQP FGQVPAIEDG YLKLFESRAI ARYYATKYAD QGTDLLGKTL EGRAIVDQWV
101: EVENNYFYAV ALPLVMNVVF KPKSGKPCDV ALVEELKVKF DKVLDVYENR LATNRYLGGD EFTLADLSHM PGMRYIMNET SLSGLVTSRE NLNRWWNEIS
201: ARPAWKKLME LAAY

Arabidopsis Description

GSTF11Glutathione S-transferase F11 [Source:UniProtKB/Swiss-Prot;Acc:Q96324]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.