Factsheet for Zm00001d012675_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 20089766
extracellular: 20408568
plastid: 22065420
plastid: 23198870
nucleus: 24677780
mitochondrion: 27297264

msms PMID: 24677780 doi

B Guo, Y Chen, C Li, T Wang, R Wang, B Wang, S Hu, X Du, H Xing, X Song, Y Yao, Q Sun, Z Ni

State Key Laboratory for Agrobiotechnology, Key Laboratory of Crop Heterosis and Utilization (MOE), Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing, China; National Plant Gene Research Centre (Beijing), Beijing, China.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03661	Sorghum	cytosol	95.33	95.33
TraesCS3B01G334500.1	Wheat	cytosol	79.91	80.66
TraesCS3D01G299900.1	Wheat	extracellular, golgi	78.97	79.72
TraesCS3A01G302100.1	Wheat	cytosol	77.57	78.3
Os01t0764000-01	Rice	cytosol	76.17	75.81
TraesCS3B01G334300.1	Wheat	cytosol	73.83	72.48
TraesCS3A01G302300.1	Wheat	cytosol	73.83	72.48
HORVU3Hr1G074000.1	Barley	cytosol	72.9	71.56
HORVU3Hr1G074020.5	Barley	cytosol	74.3	70.35
TraesCS3D01G299700.1	Wheat	cytosol	73.83	66.95
HORVU3Hr1G074040.3	Barley	cytosol, plasma membrane	79.91	59.58
GSMUA_Achr2P02330_001	Banana	cytosol	58.41	57.87
Zm00001d024839_P001	Maize	extracellular	57.48	55.16
Zm00001d043344_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.07	53.57
VIT_07s0104g01800.t01	Wine grape	cytosol	52.8	52.07
Zm00001d010870_P001	Maize	extracellular	56.54	51.71
VIT_07s0104g01810.t01	Wine grape	cytosol	51.87	51.15
KRH31902	Soybean	cytosol	51.4	50.46
KRH71551	Soybean	cytosol	51.4	50.0
Zm00001d042216_P001	Maize	extracellular, plasma membrane	49.53	47.96
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.26	45.21
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.26	45.21
CDX93963	Canola	cytosol	45.79	44.75
AT3G62760.1	Thale cress	cytosol	45.79	44.75
Zm00001d027542_P001	Maize	endoplasmic reticulum	37.38	33.47
Zm00001d027541_P001	Maize	extracellular	33.64	31.86
Zm00001d048354_P001	Maize	extracellular	33.18	31.42
Zm00001d027540_P001	Maize	nucleus	32.24	30.67
Zm00001d048353_P001	Maize	extracellular	31.78	30.22
Zm00001d021470_P001	Maize	cytosol	28.04	20.0
Zm00001d029801_P002	Maize	extracellular	26.17	18.98
Zm00001d027539_P001	Maize	extracellular, mitochondrion, plastid	25.7	18.03
Zm00001d029799_P002	Maize	cytosol	20.56	16.06
Zm00001d021469_P002	Maize	cytosol	26.64	2.03
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	ProteinID:AQL00250.1	UniProt:B6SKA0	EMBL:BT069650	ncoils:Coil	EMBL:EU953165
EMBL:EU954484	EMBL:EU960197	EMBL:EU964244	GO:GO:0000302	GO:GO:0003674	GO:GO:0003824
GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006950	GO:GO:0008150
GO:GO:0009410	GO:GO:0009635	GO:GO:0009719	GO:GO:0009751	GO:GO:0016740	GO:GO:0032991
GO:GO:0042542	GO:GO:0043234	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF10	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000011EF8B	EnsemblPlantsGene:Zm00001d012675	EnsemblPlants:Zm00001d012675_P001	EnsemblPlants:Zm00001d012675_T001	:	:

Description

glutathione-S-transferase1Glutathione S-transferase 1

Coordinates

chr8:+:178411857..178414647

Molecular Weight (calculated)

23808.8 Da

IEP (calculated)

5.339

GRAVY (calculated)

-0.014

Length

214 amino acids

Sequence
(BLAST)

001: MAPMKLYGAV MSWNVTRCAT ALEEAGSDYE IVPINFATAE HKSPEHLVRN PFGQVPALQD GDLYLFESRA ICKYAARKNK PELLREGNLE EAAMVDVWIE
101: VEANQYTAAL NPILFQVLIS PMLGGTTDQK VVDENLEKLK KVLEVYEARL TKCKYLAGDF LSLADLNHVS VTLCLFATPY ASVLDAYPHV KAWWSGLMER
201: PSVQKVAALM KPSA

Best Arabidopsis Sequence Match ( AT3G62760.1 )
(BLAST)

001: MAMKLYGDEM SACVARVLLC LHEKNTEFEL VPVNLFACHH KLPSFLSMNP FGKVPALQDD DLTLFESRAI TAYIAEKHRD KGTDLTRHED PKEAAIVKLW
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN

Arabidopsis Description

GSTF13Glutathione S-transferase F13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.