Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G334300.1 | Wheat | cytosol | 94.04 | 94.04 |
| HORVU3Hr1G074000.1 | Barley | cytosol | 93.12 | 93.12 |
| HORVU3Hr1G074020.5 | Barley | cytosol | 91.28 | 88.05 |
| TraesCS3D01G299700.1 | Wheat | cytosol | 94.5 | 87.29 |
| TraesCS3A01G302100.1 | Wheat | cytosol | 76.61 | 78.77 |
| Zm00001d012675_P001 | Maize | plastid | 72.48 | 73.83 |
| EES03661 | Sorghum | cytosol | 72.48 | 73.83 |
| Os01t0764000-01 | Rice | cytosol | 71.56 | 72.56 |
| KXG37119 | Sorghum | cytosol | 74.31 | 62.31 |
| TraesCS1A01G078900.1 | Wheat | cytosol | 58.72 | 58.45 |
| TraesCS1A01G078800.1 | Wheat | golgi | 58.72 | 58.45 |
| TraesCS7A01G191500.1 | Wheat | cytosol | 40.37 | 55.0 |
| TraesCS1A01G013900.1 | Wheat | cytosol | 53.21 | 53.95 |
| GSMUA_Achr2P02330_001 | Banana | cytosol | 53.21 | 53.7 |
| TraesCS4A01G349700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 53.21 | 52.25 |
| TraesCS1A01G102700.1 | Wheat | endoplasmic reticulum | 52.75 | 51.57 |
| TraesCS5A01G024100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 52.29 | 51.35 |
| TraesCS2A01G045400.1 | Wheat | cytosol | 56.88 | 50.2 |
| TraesCS7A01G525700.1 | Wheat | cytosol | 49.54 | 49.77 |
| TraesCS5A01G432600.1 | Wheat | cytosol | 47.71 | 47.71 |
| TraesCS1A01G102900.1 | Wheat | cytosol | 49.08 | 47.14 |
| VIT_07s0104g01800.t01 | Wine grape | cytosol | 46.79 | 47.0 |
| TraesCS7A01G525600.1 | Wheat | cytosol | 46.33 | 46.98 |
| TraesCS1A01G102800.1 | Wheat | cytosol | 48.17 | 46.88 |
| VIT_07s0104g01810.t01 | Wine grape | cytosol | 46.33 | 46.54 |
| KRH31902 | Soybean | cytosol | 45.87 | 45.87 |
| TraesCS5A01G024000.1 | Wheat | cytosol | 49.08 | 45.34 |
| KRH71551 | Soybean | cytosol | 45.41 | 45.0 |
| TraesCS1A01G103000.1 | Wheat | extracellular | 45.87 | 44.25 |
| TraesCS3A01G452900.1 | Wheat | golgi | 42.2 | 43.19 |
| Bra014394.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 42.2 | 42.01 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 42.2 | 42.01 |
| TraesCS3A01G309100.2 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 49.08 | 41.31 |
| CDX93963 | Canola | cytosol | 41.28 | 41.1 |
| TraesCS3A01G309000.2 | Wheat | cytosol | 48.17 | 40.54 |
| AT3G62760.1 | Thale cress | cytosol | 40.37 | 40.18 |
| TraesCS5A01G408300.1 | Wheat | cytosol, peroxisome, plastid | 38.99 | 38.64 |
| TraesCS3A01G452800.1 | Wheat | cytosol | 37.16 | 36.82 |
| TraesCS5A01G502500.1 | Wheat | endoplasmic reticulum, peroxisome | 34.4 | 33.19 |
| TraesCS5A01G502300.1 | Wheat | cytosol | 29.36 | 28.7 |
| TraesCS5A01G502400.1 | Wheat | cytosol | 27.52 | 26.91 |
| TraesCS1A01G203900.1 | Wheat | cytosol | 28.9 | 24.71 |
| TraesCS3A01G055800.1 | Wheat | cytosol | 27.98 | 8.13 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GST_C |
| InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 |
| PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF10 |
| SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | EnsemblPlantsGene:TraesCS3A01G302300 | EnsemblPlants:TraesCS3A01G302300.1 | TIGR:cd03053 |
| TIGR:cd03187 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:535716019..535719701
Molecular Weight (calculated)
24531.7 Da
IEP (calculated)
6.619
GRAVY (calculated)
-0.058
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVKLYGMT MSWNVTRCVA ALEEAGVEYD VVPIDFGAGE HKTPDHLARN PFGQMPVLQD GDFYVWESHA ICKYTCRKNK PELLKEGNLK ESAMVDVWLE
101: VEAHQYTATL EPIILECLVR PMFGRATDQK TVEDNLVKLK KVLEVYEARL TKCKYLAGDF LSLADLNHVS ATACLAATPY ASLFDAYPHV KAWWSGLMAR
201: PSVQMIAALK KPYFHNSV
101: VEAHQYTATL EPIILECLVR PMFGRATDQK TVEDNLVKLK KVLEVYEARL TKCKYLAGDF LSLADLNHVS ATACLAATPY ASLFDAYPHV KAWWSGLMAR
201: PSVQMIAALK KPYFHNSV
001: MAGIKVFGHP ASTATRRVLI ALHEKNVDFE FVHVELKDGE HKKEPFILRN PFGKVPAFED GDFKIFESRA ITQYIAHEFS DKGNNLLSTG KDMAIIAMGI
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL
Arabidopsis Description
GSTF6Glutathione S-transferase F6 [Source:UniProtKB/Swiss-Prot;Acc:P42760]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.