Factsheet for TraesCS2A01G045400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G044100.1	Wheat	cytosol	83.81	95.83
TraesCS1A01G078800.1	Wheat	golgi	68.42	77.17
TraesCS1A01G078900.1	Wheat	cytosol	65.99	74.43
TraesCS7A01G191500.1	Wheat	cytosol	40.49	62.5
GSMUA_Achr2P02330_001	Banana	cytosol	53.44	61.11
TraesCS5A01G432600.1	Wheat	cytosol	53.85	61.01
TraesCS3A01G302100.1	Wheat	cytosol	51.42	59.91
TraesCS3A01G302300.1	Wheat	cytosol	50.2	56.88
TraesCS7A01G525700.1	Wheat	cytosol	48.99	55.76
VIT_07s0104g01810.t01	Wine grape	cytosol	48.18	54.84
VIT_07s0104g01800.t01	Wine grape	cytosol	48.18	54.84
TraesCS1A01G102700.1	Wheat	endoplasmic reticulum	49.39	54.71
TraesCS1A01G013900.1	Wheat	cytosol	47.37	54.42
TraesCS7A01G525600.1	Wheat	cytosol	46.15	53.02
TraesCS5A01G024100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.96	52.25
TraesCS4A01G349700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.96	52.25
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.75	51.6
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.75	51.6
TraesCS1A01G102900.1	Wheat	cytosol	47.37	51.54
CDX93963	Canola	cytosol	45.34	51.14
KRH71551	Soybean	cytosol	44.94	50.45
TraesCS3A01G309100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.23	49.81
TraesCS5A01G024000.1	Wheat	cytosol	47.37	49.58
TraesCS1A01G103000.1	Wheat	extracellular	45.34	49.56
KRH31902	Soybean	cytosol	43.72	49.54
AT3G62760.1	Thale cress	cytosol	43.72	49.32
TraesCS1A01G102800.1	Wheat	cytosol	44.53	49.11
TraesCS3A01G309000.2	Wheat	cytosol	51.01	48.65
TraesCS5A01G408300.1	Wheat	cytosol, peroxisome, plastid	42.11	47.27
TraesCS3A01G452900.1	Wheat	golgi	40.08	46.48
TraesCS3A01G452800.1	Wheat	cytosol	38.46	43.18
TraesCS5A01G502500.1	Wheat	endoplasmic reticulum, peroxisome	33.2	36.28
TraesCS5A01G502300.1	Wheat	cytosol	31.17	34.53
TraesCS5A01G502400.1	Wheat	cytosol	31.17	34.53
TraesCS1A01G203900.1	Wheat	cytosol	28.34	27.45
TraesCS3A01G055800.1	Wheat	cytosol	28.34	9.33
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF1	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS2A01G045400	EnsemblPlants:TraesCS2A01G045400.1	TIGR:cd03053	TIGR:cd03187

Description

No Description!

Coordinates

chr2A:+:17857252..17858086

Molecular Weight (calculated)

28278.9 Da

IEP (calculated)

5.749

GRAVY (calculated)

-0.182

Length

247 amino acids

Sequence
(BLAST)

001: MAPVKVFGQA MSPNVARVLV FLEEAGTDYE LVDVDFQAKE HKRPDHLARN PFGQIPAFQD GDLLLFGTYL TPPMSHDHNP HFLVKLDEVL RFLLVHAESR
101: AIAKYVARKY KTDEADLLRE GDLSEAAMVD VWTEVEAHTY SAALSPIVYE CLIFPLMHGK PTDEKIVDES LEKLRKVLEV YEERLSKHRY LAGDFLSFAD
201: LNHFPYTFYF MATPHGALFE SYPRVKAWWD SIMSRPAIQK LSATMTP

Best Arabidopsis Sequence Match ( AT2G02930.1 )
(BLAST)

001: MAGIKVFGHP ASTSTRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLPAD SKNIAQYAIM
101: SIGIQVEAHQ FDPVASKLAW EQVFKFNYGL NTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VL

Arabidopsis Description

GSTF3Glutathione S-transferase F3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLM6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.