Factsheet for TraesCS1A01G103000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G114300.1	Wheat	endoplasmic reticulum, extracellular	95.58	95.58
TraesCS1D01G095100.1	Wheat	endoplasmic reticulum, extracellular	92.92	92.92
HORVU1Hr1G021170.1	Barley	cytosol	91.59	89.61
TraesCS1A01G102900.1	Wheat	cytosol	87.17	86.78
Os05t0148900-01	Rice	extracellular	58.41	66.33
EES17713	Sorghum	endoplasmic reticulum, extracellular	61.5	60.7
TraesCS1A01G102700.1	Wheat	endoplasmic reticulum	58.41	59.19
GSMUA_Achr2P02330_001	Banana	cytosol	53.98	56.48
TraesCS1A01G078800.1	Wheat	golgi	52.21	53.88
TraesCS1A01G078900.1	Wheat	cytosol	50.88	52.51
TraesCS1A01G102800.1	Wheat	cytosol	50.0	50.45
TraesCS5A01G024100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.67	49.55
TraesCS3A01G302100.1	Wheat	cytosol	46.46	49.53
TraesCS4A01G349700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.23	49.1
VIT_07s0104g01800.t01	Wine grape	cytosol	46.9	48.85
TraesCS5A01G432600.1	Wheat	cytosol	46.9	48.62
TraesCS7A01G525700.1	Wheat	cytosol	46.46	48.39
VIT_07s0104g01810.t01	Wine grape	cytosol	46.02	47.93
TraesCS1A01G013900.1	Wheat	cytosol	45.13	47.44
TraesCS7A01G191500.1	Wheat	cytosol	33.19	46.88
TraesCS7A01G525600.1	Wheat	cytosol	44.25	46.51
TraesCS5A01G024000.1	Wheat	cytosol	48.23	46.19
TraesCS3A01G302300.1	Wheat	cytosol	44.25	45.87
TraesCS2A01G045400.1	Wheat	cytosol	49.56	45.34
KRH71551	Soybean	cytosol	43.36	44.55
KRH31902	Soybean	cytosol	42.92	44.5
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.04	43.38
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.04	43.38
AT3G62760.1	Thale cress	cytosol	41.59	42.92
CDX93963	Canola	cytosol	41.59	42.92
TraesCS3A01G309100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.35	41.31
TraesCS3A01G309000.2	Wheat	cytosol	45.58	39.77
TraesCS3A01G452900.1	Wheat	golgi	36.73	38.97
TraesCS3A01G452800.1	Wheat	cytosol	36.73	37.73
TraesCS5A01G408300.1	Wheat	cytosol, peroxisome, plastid	36.28	37.27
TraesCS5A01G502500.1	Wheat	endoplasmic reticulum, peroxisome	36.28	36.28
TraesCS5A01G502400.1	Wheat	cytosol	29.2	29.6
TraesCS1A01G203900.1	Wheat	cytosol	32.3	28.63
TraesCS5A01G502300.1	Wheat	cytosol	26.55	26.91
TraesCS3A01G055800.1	Wheat	cytosol	29.65	8.93
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF12	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS1A01G103000	EnsemblPlants:TraesCS1A01G103000.1	TIGR:cd03053	TIGR:cd03187

Description

No Description!

Coordinates

chr1A:+:99148751..99149625

Molecular Weight (calculated)

24755.0 Da

IEP (calculated)

4.931

GRAVY (calculated)

0.218

Length

226 amino acids

Sequence
(BLAST)

001: MGGAVKVYGV AASPFVATVL LCLEEVGADY ELLPLDMAAR EQRTEPYLSR NPFGKIPALE DGELTIFESR AISRYVLRKY GGTGATDLLR ASSLEESAMV
101: DVWMEVEAHQ YQPAIANIVR QCVILPFIGG ARDQAVVDEY VGKLEKVLDV YEARLSSSPY LAGDFFSLAD LVHFGFAYCL VAGTEYATLL ESRASVMAWW
201: GRIMTRPAVR KVAPLIHLGL KLSSPA

Best Arabidopsis Sequence Match ( AT2G02930.1 )
(BLAST)

001: MAGIKVFGHP ASTSTRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLPAD SKNIAQYAIM
101: SIGIQVEAHQ FDPVASKLAW EQVFKFNYGL NTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VL

Arabidopsis Description

GSTF3Glutathione S-transferase F3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLM6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.