Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G113700.1 | Wheat | endoplasmic reticulum | 94.2 | 94.62 |
| TraesCS1D01G094900.1 | Wheat | cytosol | 93.75 | 84.34 |
| HORVU1Hr1G021150.2 | Barley | cytosol, plastid | 94.2 | 79.92 |
| TraesCS1A01G102700.1 | Wheat | endoplasmic reticulum | 76.34 | 76.68 |
| KXG21305 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 66.52 | 69.63 |
| EES17708 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 66.96 | 66.37 |
| Zm00001d024839_P001 | Maize | extracellular | 65.18 | 65.47 |
| Zm00001d010870_P001 | Maize | extracellular | 65.18 | 62.39 |
| TraesCS4A01G349700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 61.16 | 61.71 |
| TraesCS5A01G024100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 58.93 | 59.46 |
| TraesCS5A01G024000.1 | Wheat | cytosol | 60.27 | 57.2 |
| GSMUA_Achr2P02330_001 | Banana | cytosol | 52.68 | 54.63 |
| TraesCS3A01G302100.1 | Wheat | cytosol | 50.0 | 52.83 |
| TraesCS1A01G078800.1 | Wheat | golgi | 50.45 | 51.6 |
| TraesCS5A01G432600.1 | Wheat | cytosol | 50.0 | 51.38 |
| VIT_07s0104g01800.t01 | Wine grape | cytosol | 49.11 | 50.69 |
| TraesCS1A01G102900.1 | Wheat | cytosol | 51.34 | 50.66 |
| TraesCS1A01G078900.1 | Wheat | cytosol | 49.11 | 50.23 |
| TraesCS1A01G103000.1 | Wheat | extracellular | 50.45 | 50.0 |
| VIT_07s0104g01810.t01 | Wine grape | cytosol | 47.77 | 49.31 |
| TraesCS3A01G302300.1 | Wheat | cytosol | 46.88 | 48.17 |
| TraesCS7A01G525700.1 | Wheat | cytosol | 46.43 | 47.93 |
| KRH71551 | Soybean | cytosol | 45.54 | 46.36 |
| KRH31902 | Soybean | cytosol | 45.09 | 46.33 |
| Bra014394.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 44.64 | 45.66 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 44.64 | 45.66 |
| TraesCS7A01G525600.1 | Wheat | cytosol | 43.3 | 45.12 |
| CDX93963 | Canola | cytosol | 43.75 | 44.75 |
| TraesCS2A01G045400.1 | Wheat | cytosol | 49.11 | 44.53 |
| TraesCS1A01G013900.1 | Wheat | cytosol | 42.41 | 44.19 |
| AT3G62760.1 | Thale cress | cytosol | 42.41 | 43.38 |
| TraesCS7A01G191500.1 | Wheat | cytosol | 29.91 | 41.88 |
| TraesCS3A01G452900.1 | Wheat | golgi | 39.29 | 41.31 |
| TraesCS3A01G309100.2 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 46.88 | 40.54 |
| TraesCS5A01G408300.1 | Wheat | cytosol, peroxisome, plastid | 39.73 | 40.45 |
| TraesCS3A01G309000.2 | Wheat | cytosol | 45.98 | 39.77 |
| TraesCS3A01G452800.1 | Wheat | cytosol | 35.27 | 35.91 |
| TraesCS5A01G502500.1 | Wheat | endoplasmic reticulum, peroxisome | 36.16 | 35.84 |
| TraesCS5A01G502400.1 | Wheat | cytosol | 33.04 | 33.18 |
| TraesCS5A01G502300.1 | Wheat | cytosol | 30.8 | 30.94 |
| TraesCS1A01G203900.1 | Wheat | cytosol | 31.7 | 27.84 |
| TraesCS3A01G055800.1 | Wheat | cytosol | 29.46 | 8.8 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GST_C | InterPro:GST_Phi_C |
| InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 |
| PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF17 | SUPFAM:SSF47616 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | EnsemblPlantsGene:TraesCS1A01G102800 | EnsemblPlants:TraesCS1A01G102800.1 | TIGR:cd03053 | TIGR:cd03187 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:99071111..99071878
Molecular Weight (calculated)
25061.1 Da
IEP (calculated)
6.095
GRAVY (calculated)
-0.195
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPAVKVHG WAMSPFVARA LLCLEEAGVE YELVPMSREA GDHRQPDFLA RNPFGQVPVL EDGDLTIFES RAVARHVLRK HKPELLGSGS PESAAKVDVW
101: LEVEAHQHQT PAGTIVMQCI LTPFLGCERD QTAIDENAAK LTKLFDVYEA RLSASRYLAG DSLSLADLSH FPLMRYFMDT EYASLVVERP HVKVWWEELK
201: ARPAAKRVTE FMPPNFGFGK KAQE
101: LEVEAHQHQT PAGTIVMQCI LTPFLGCERD QTAIDENAAK LTKLFDVYEA RLSASRYLAG DSLSLADLSH FPLMRYFMDT EYASLVVERP HVKVWWEELK
201: ARPAAKRVTE FMPPNFGFGK KAQE
001: MVLTIYAPLF ASSKRAVVTL VEKGVSFETV NVDLMKGEQR QPEYLAIQPF GKIPVLVDGD YKIFESRAIM RYIAEKYRSQ GPDLLGKTIE ERGQVEQWLD
101: VEATSYHPPL LALTLNIVFA PLMGFPADEK VIKESEEKLA EVLDVYEAQL SKNEYLAGDF VSLADLAHLP FTEYLVGPIG KAHLIKDRKH VSAWWDKISS
201: RAAWKEVSAK YSLPV
101: VEATSYHPPL LALTLNIVFA PLMGFPADEK VIKESEEKLA EVLDVYEAQL SKNEYLAGDF VSLADLAHLP FTEYLVGPIG KAHLIKDRKH VSAWWDKISS
201: RAAWKEVSAK YSLPV
Arabidopsis Description
GSTF10Glutathione S-transferase F10 [Source:UniProtKB/Swiss-Prot;Acc:P42761]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.