Factsheet for TraesCS1A01G013900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G011800.1	Wheat	cytosol	97.21	97.21
HORVU1Hr1G002160.2	Barley	cytosol	95.35	95.35
Os01t0371500-01	Rice	cytosol	68.84	68.52
TraesCS7A01G525700.1	Wheat	cytosol	66.05	65.44
TraesCS7A01G525600.1	Wheat	cytosol	64.19	64.19
TraesCS5A01G432600.1	Wheat	cytosol	60.93	60.09
GSMUA_Achr2P02330_001	Banana	cytosol	56.28	56.02
TraesCS1A01G078900.1	Wheat	cytosol	56.74	55.71
TraesCS1A01G078800.1	Wheat	golgi	56.74	55.71
TraesCS3A01G302100.1	Wheat	cytosol	53.95	54.72
TraesCS3A01G302300.1	Wheat	cytosol	53.95	53.21
TraesCS4A01G349700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.95	52.25
TraesCS1A01G102700.1	Wheat	endoplasmic reticulum	49.77	47.98
TraesCS5A01G024100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.3	47.75
TraesCS2A01G045400.1	Wheat	cytosol	54.42	47.37
TraesCS1A01G102900.1	Wheat	cytosol	49.3	46.7
VIT_07s0104g01800.t01	Wine grape	cytosol	46.98	46.54
VIT_07s0104g01810.t01	Wine grape	cytosol	46.05	45.62
TraesCS1A01G103000.1	Wheat	extracellular	47.44	45.13
TraesCS7A01G191500.1	Wheat	cytosol	33.49	45.0
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.58	44.75
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.58	44.75
TraesCS5A01G024000.1	Wheat	cytosol	48.84	44.49
CDX93963	Canola	cytosol	45.12	44.29
KRH31902	Soybean	cytosol	44.65	44.04
KRH71551	Soybean	cytosol	44.65	43.64
TraesCS3A01G309100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.56	43.63
TraesCS3A01G309000.2	Wheat	cytosol	52.09	43.24
AT3G62760.1	Thale cress	cytosol	43.72	42.92
TraesCS1A01G102800.1	Wheat	cytosol	44.19	42.41
TraesCS3A01G452900.1	Wheat	golgi	38.6	38.97
TraesCS3A01G452800.1	Wheat	cytosol	38.6	37.73
TraesCS5A01G408300.1	Wheat	cytosol, peroxisome, plastid	36.74	35.91
TraesCS5A01G502500.1	Wheat	endoplasmic reticulum, peroxisome	37.67	35.84
TraesCS5A01G502300.1	Wheat	cytosol	33.49	32.29
TraesCS5A01G502400.1	Wheat	cytosol	31.63	30.49
TraesCS1A01G203900.1	Wheat	cytosol	31.16	26.27
TraesCS3A01G055800.1	Wheat	cytosol	29.77	8.53
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C
InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF6
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS1A01G013900	EnsemblPlants:TraesCS1A01G013900.1	TIGR:cd03053
TIGR:cd03187	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:7675876..7677226

Molecular Weight (calculated)

24097.5 Da

IEP (calculated)

5.594

GRAVY (calculated)

0.075

Length

215 amino acids

Sequence
(BLAST)

001: MAPVKVYGLP MNGSVARVLA CLEEVGAEYE VVAVDLHTGE HKRLPHLARN PFGQVPAFQD GDLVLFESRA ISKYILRKGS SDLLRENNLS ESAMVDVWLD
101: VESQKFDSVM LPIIFQGLVI PVYMGGTSDL KVLEENLEKL KEIMEVYEER LSKYKYLAGD FISLADISHF PMVHLLHETP YAAVLDAYPH VKAWIAGVMD
201: RPTVKKVMGL MKTFG

Best Arabidopsis Sequence Match ( AT1G02920.1 )
(BLAST)

001: MAGIKVFGHP ASTATRRVLI ALHEKNLDFE FVHIELKDGE HKKEPFIFRN PFGKVPAFED GDFKLFESRA ITQYIAHFYS DKGNQLVSLG SKDIAGIAMG
101: IEIESHEFDP VGSKLVWEQV LKPLYGMTTD KTVVEEEEAK LAKVLDVYEH RLGESKYLAS DKFTLVDLHT IPVIQYLLGT PTKKLFDERP HVSAWVADIT
201: SRPSAKKVL

Arabidopsis Description

GSTF7Glutathione S-transferase F7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.