Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G013900.1 | Wheat | cytosol | 95.35 | 95.35 |
| TraesCS1D01G011800.1 | Wheat | cytosol | 94.42 | 94.42 |
| Os01t0371500-01 | Rice | cytosol | 69.3 | 68.98 |
| HORVU7Hr1G116650.3 | Barley | cytosol | 65.58 | 64.98 |
| GSMUA_Achr2P02330_001 | Banana | cytosol | 56.74 | 56.48 |
| HORVU7Hr1G039140.3 | Barley | cytosol | 56.28 | 55.25 |
| HORVU2Hr1G095460.1 | Barley | cytosol | 55.35 | 54.59 |
| HORVU5Hr1G104670.2 | Barley | cytosol | 60.47 | 54.17 |
| HORVU5Hr1G118800.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 54.42 | 52.7 |
| HORVU3Hr1G074000.1 | Barley | cytosol | 52.56 | 51.83 |
| HORVU3Hr1G074020.5 | Barley | cytosol | 53.95 | 51.33 |
| HORVU1Hr1G021140.1 | Barley | endoplasmic reticulum | 50.23 | 48.43 |
| VIT_07s0104g01800.t01 | Wine grape | cytosol | 47.91 | 47.47 |
| HORVU7Hr1G036850.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 49.3 | 47.11 |
| HORVU1Hr1G021160.5 | Barley | cytosol | 50.23 | 46.75 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 47.44 | 46.58 |
| Bra014394.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 47.44 | 46.58 |
| VIT_07s0104g01810.t01 | Wine grape | cytosol | 46.98 | 46.54 |
| CDX93963 | Canola | cytosol | 46.98 | 46.12 |
| HORVU1Hr1G021180.1 | Barley | cytosol | 49.3 | 45.11 |
| HORVU3Hr1G117390.1 | Barley | cytosol | 53.49 | 45.1 |
| HORVU1Hr1G021170.1 | Barley | cytosol | 48.37 | 45.02 |
| HORVU5Hr1G006630.2 | Barley | cytosol | 47.91 | 44.78 |
| AT3G62760.1 | Thale cress | cytosol | 45.58 | 44.75 |
| HORVU3Hr1G117370.1 | Barley | cytosol | 53.49 | 44.57 |
| KRH31902 | Soybean | cytosol | 45.12 | 44.5 |
| KRH71551 | Soybean | cytosol | 45.12 | 44.09 |
| HORVU3Hr1G074040.3 | Barley | cytosol, plasma membrane | 55.81 | 41.81 |
| HORVU3Hr1G097950.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.4 | 41.59 |
| HORVU1Hr1G017050.1 | Barley | plastid | 40.47 | 38.84 |
| HORVU1Hr1G021150.2 | Barley | cytosol, plastid | 47.44 | 38.64 |
| HORVU3Hr1G097900.3 | Barley | cytosol | 40.0 | 38.56 |
| HORVU4Hr1G081150.1 | Barley | cytosol | 34.88 | 33.63 |
| HORVU4Hr1G081100.1 | Barley | endoplasmic reticulum | 38.14 | 32.54 |
| HORVU3Hr1G097870.1 | Barley | plastid | 38.6 | 31.32 |
| HORVU4Hr1G081110.1 | Barley | cytosol | 32.09 | 30.94 |
| HORVU1Hr1G052470.2 | Barley | cytosol | 30.7 | 25.38 |
| HORVU4Hr1G081170.1 | Barley | cytosol, peroxisome, plastid | 31.63 | 17.22 |
| HORVU5Hr1G085070.43 | Barley | cytosol | 27.91 | 2.52 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GST_C |
| InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | EnsemblPlantsGene:HORVU1Hr1G002160 | EnsemblPlants:HORVU1Hr1G002160.2 |
| InterPro:IPR004045 | InterPro:IPR010987 | UniProt:M0Y232 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF6 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI000296A7AF | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:4328347..4329682
Molecular Weight (calculated)
24035.4 Da
IEP (calculated)
5.841
GRAVY (calculated)
0.078
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVKVYGLP MNGSVARVLA CLEEVGAEYE VVAVDLHTGE HKRPPHLARN PFGQVPAFQD GDLVLFESRA ISKYILRKGS SDLLRENNLS ESAMIDVWLD
101: VESHKFDNAM LPIIFQGLVI PVYMGGTSDL KILEENLEKL KEIMEVYEER LSKSKYLAGD FISLADISHF PMVHLLHETP YAAVLDAYPH VKAWIAGVMD
201: RPAVKKVIVL MKTFG
101: VESHKFDNAM LPIIFQGLVI PVYMGGTSDL KILEENLEKL KEIMEVYEER LSKSKYLAGD FISLADISHF PMVHLLHETP YAAVLDAYPH VKAWIAGVMD
201: RPAVKKVIVL MKTFG
001: MAGIKVFGHP ASTATRRVLI ALHEKNVDFE FVHVELKDGE HKKEPFILRN PFGKVPAFED GDFKIFESRA ITQYIAHEFS DKGNNLLSTG KDMAIIAMGI
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL
Arabidopsis Description
GSTF6Glutathione S-transferase F6 [Source:UniProtKB/Swiss-Prot;Acc:P42760]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.