Factsheet for TraesCS3D01G299900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 19786127
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 19786127 doi

FJ Kong, A Oyanagi, S Komatsu

National Institute of Crop Science, Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G334500.1	Wheat	cytosol	99.06	99.06
TraesCS3A01G302100.1	Wheat	cytosol	97.17	97.17
Zm00001d012675_P001	Maize	plastid	79.72	78.97
EES03661	Sorghum	cytosol	78.77	78.04
Os01t0764000-01	Rice	cytosol	75.94	74.88
TraesCS3D01G299700.1	Wheat	cytosol	81.13	72.88
HORVU3Hr1G074040.3	Barley	cytosol, plasma membrane	97.17	71.78
KXG37119	Sorghum	cytosol	77.36	63.08
TraesCS7D01G192500.1	Wheat	cytosol	62.26	60.27
TraesCS1D01G081200.1	Wheat	cytosol	61.32	59.36
TraesCS2D01G044100.1	Wheat	cytosol	60.38	59.26
GSMUA_Achr2P02330_001	Banana	cytosol	59.43	58.33
TraesCS2D01G579500.1	Wheat	cytosol	58.96	57.08
TraesCS2D01G503200.1	Wheat	cytosol	58.96	57.08
TraesCS5D01G268900.1	Wheat	cytosol	58.49	56.36
TraesCS7D01G479100.1	Wheat	cytosol	58.49	56.36
TraesCS1D01G094700.1	Wheat	endoplasmic reticulum	58.96	56.31
TraesCS5D01G418100.1	Wheat	cytosol	58.49	56.11
TraesCS1D01G011800.1	Wheat	cytosol	55.66	54.88
TraesCS5D01G440700.1	Wheat	cytosol	54.72	53.21
TraesCS2D01G400000.2	Wheat	cytosol	54.25	53.0
TraesCS5D01G030000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.19	52.7
TraesCS1D01G094800.1	Wheat	endoplasmic reticulum, extracellular	55.66	52.68
TraesCS1D01G095400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.66	52.68
TraesCS7D01G514500.1	Wheat	cytosol	52.36	51.15
TraesCS3D01G133200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.72	50.66
TraesCS6D01G016700.1	Wheat	cytosol	58.02	50.62
KRH31902	Soybean	cytosol	51.89	50.46
TraesCS3D01G133100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.25	50.22
KRH71551	Soybean	cytosol	51.42	49.55
VIT_07s0104g01800.t01	Wine grape	cytosol	50.47	49.31
VIT_07s0104g01810.t01	Wine grape	cytosol	49.53	48.39
TraesCS1D01G095100.1	Wheat	endoplasmic reticulum, extracellular	50.0	46.9
TraesCS1D01G095000.1	Wheat	cytosol	50.0	46.49
TraesCS3D01G445400.1	Wheat	golgi	46.7	46.48
TraesCS1D01G094900.1	Wheat	cytosol	53.77	45.78
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.81	43.38
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.81	43.38
CDX93963	Canola	cytosol	44.34	42.92
AT3G62760.1	Thale cress	cytosol	43.87	42.47
TraesCS3D01G445300.1	Wheat	cytosol	43.4	41.26
TraesCS4D01G328000.1	Wheat	peroxisome	38.21	35.84
TraesCS4D01G327800.1	Wheat	cytosol	33.96	32.29
TraesCS4D01G327900.1	Wheat	cytosol	32.08	30.49
TraesCS1D01G207400.1	Wheat	cytosol	28.3	23.72
TraesCS4D01G327700.1	Wheat	cytosol, nucleus, peroxisome	27.36	17.96
TraesCS3D01G055700.1	Wheat	cytosol	30.66	8.58
TraesCS5D01G343100.1	Wheat	cytosol	27.83	1.38
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF10	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS3D01G299900	EnsemblPlants:TraesCS3D01G299900.1	TIGR:cd03053	TIGR:cd03187

Description

No Description!

Coordinates

chr3D:-:414766661..414769141

Molecular Weight (calculated)

23340.2 Da

IEP (calculated)

6.149

GRAVY (calculated)

0.039

Length

212 amino acids

Sequence
(BLAST)

001: MAPVKLYGAT LSWNVTRCVA ALEEAGVEYE LVPINFGTGE HKSPDHLARN PFGQVPALQD GDLYVFESRA ICKYACRKNK PELLKEGDIK ESAMVDVWLE
101: VEAHQYTAAL SPILFECLIH PMLGGATDQK VIDDNLVKIK NVLAVYEAHL SKSKYLAGDS LSLADLNHVS VTLCLAATPY ASLFDAYPHV KAWWTDLLAR
201: PSVQKVAALM KP

Best Arabidopsis Sequence Match ( AT1G02920.1 )
(BLAST)

001: MAGIKVFGHP ASTATRRVLI ALHEKNLDFE FVHIELKDGE HKKEPFIFRN PFGKVPAFED GDFKLFESRA ITQYIAHFYS DKGNQLVSLG SKDIAGIAMG
101: IEIESHEFDP VGSKLVWEQV LKPLYGMTTD KTVVEEEEAK LAKVLDVYEH RLGESKYLAS DKFTLVDLHT IPVIQYLLGT PTKKLFDERP HVSAWVADIT
201: SRPSAKKVL

Arabidopsis Description

GSTF7Glutathione S-transferase F7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.