Factsheet for TraesCS3D01G445400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G452900.1	Wheat	golgi	97.65	97.65
HORVU3Hr1G097950.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	92.49	92.06
TraesCS3B01G490600.3	Wheat	golgi	96.71	89.96
Zm00001d042216_P001	Maize	extracellular, plasma membrane	74.18	71.49
KXG34068	Sorghum	endoplasmic reticulum	71.83	69.86
Os01t0933900-01	Rice	mitochondrion	70.89	68.33
TraesCS3D01G445300.1	Wheat	cytosol	64.32	61.44
GSMUA_Achr11P...	Banana	unclear	59.15	61.16
TraesCS3D01G299900.1	Wheat	extracellular, golgi	46.48	46.7
TraesCS2D01G044100.1	Wheat	cytosol	46.48	45.83
TraesCS1D01G081200.1	Wheat	cytosol	46.48	45.21
TraesCS7D01G192500.1	Wheat	cytosol	44.13	42.92
TraesCS2D01G503200.1	Wheat	cytosol	43.66	42.47
TraesCS2D01G579500.1	Wheat	cytosol	43.66	42.47
TraesCS3D01G299700.1	Wheat	cytosol	46.01	41.53
TraesCS1D01G094700.1	Wheat	endoplasmic reticulum	43.19	41.44
TraesCS5D01G418100.1	Wheat	cytosol	42.25	40.72
TraesCS4D01G328000.1	Wheat	peroxisome	43.19	40.71
TraesCS1D01G095400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.25	40.18
TraesCS5D01G440700.1	Wheat	cytosol	40.85	39.91
TraesCS5D01G268900.1	Wheat	cytosol	40.85	39.55
TraesCS7D01G479100.1	Wheat	cytosol	40.85	39.55
TraesCS6D01G016700.1	Wheat	cytosol	44.6	39.09
TraesCS1D01G094800.1	Wheat	endoplasmic reticulum, extracellular	40.38	38.39
TraesCS2D01G400000.2	Wheat	cytosol	38.97	38.25
TraesCS1D01G011800.1	Wheat	cytosol	38.5	38.14
TraesCS5D01G030000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.97	37.39
TraesCS7D01G514500.1	Wheat	cytosol	38.03	37.33
TraesCS3D01G133200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.91	37.12
TraesCS3D01G133100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.44	36.68
TraesCS1D01G094900.1	Wheat	cytosol	42.25	36.14
TraesCS1D01G095000.1	Wheat	cytosol	37.56	35.09
TraesCS4D01G327900.1	Wheat	cytosol	36.62	34.98
TraesCS1D01G095100.1	Wheat	endoplasmic reticulum, extracellular	37.09	34.96
TraesCS4D01G327800.1	Wheat	cytosol	36.15	34.53
TraesCS1D01G207400.1	Wheat	cytosol	34.74	29.25
TraesCS4D01G327700.1	Wheat	cytosol, nucleus, peroxisome	34.74	22.91
TraesCS3D01G055700.1	Wheat	cytosol	35.21	9.89
TraesCS5D01G343100.1	Wheat	cytosol	32.39	1.61

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF19	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS3D01G445400	EnsemblPlants:TraesCS3D01G445400.1	TIGR:cd03053	TIGR:cd03187

Description

No Description!

Coordinates

chr3D:-:554398256..554399973

Molecular Weight (calculated)

23470.3 Da

IEP (calculated)

5.879

GRAVY (calculated)

-0.003

Length

213 amino acids

Sequence
(BLAST)

001: MAPIKLYGMM LSANVTRVTT LLNELGLEFD FVDVDLRTGA HKHPDFLKLN PFGQIPALQD GDEVVFESRA INRYIATKYG AELLPTPSAK LEAWLEVESH
101: HFYPPARTLV YELVIKPMLG APTDAAEVDK NAADLAKLLD VYEAHLAAGN KYLAGDAFTL ADANHMSYLF MLTKSPKADL VASRPHVKAW WEEISARPAW
201: AKTVASIPLP PGV

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.