Factsheet for VIT_18s0001g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075626	Potato	cytosol	76.68	77.38
Solyc12g094430.1.1	Tomato	plastid	76.23	76.92
GSMUA_Achr5P17880_001	Banana	cytosol	69.96	70.59
GSMUA_Achr2P11180_001	Banana	cytosol	67.26	67.57
Os03t0135300-01	Rice	plastid	61.88	61.61
TraesCS4B01G331100.1	Wheat	endoplasmic reticulum, peroxisome	60.99	60.18
TraesCS4D01G328000.1	Wheat	peroxisome	60.99	60.18
TraesCS5A01G502500.1	Wheat	endoplasmic reticulum, peroxisome	60.99	60.18
EER92907	Sorghum	cytosol, plastid	59.64	59.38
Zm00001d027542_P001	Maize	endoplasmic reticulum	59.64	55.65
HORVU4Hr1G081100.1	Barley	endoplasmic reticulum	61.44	54.37
VIT_04s0079g00690.t01	Wine grape	mitochondrion	49.78	52.11
VIT_12s0028g00920.t01	Wine grape	cytosol	47.98	49.77
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	47.98	49.54
VIT_04s0079g00710.t01	Wine grape	cytosol	46.64	48.83
VIT_07s0104g01800.t01	Wine grape	cytosol	42.15	43.32
VIT_07s0104g01810.t01	Wine grape	cytosol	42.15	43.32
VIT_07s0104g01830.t01	Wine grape	cytosol	39.91	41.4
VIT_07s0104g01820.t01	Wine grape	cytosol	39.01	40.09
VIT_07s0005g00010.t01	Wine grape	cytosol	38.12	39.72
VIT_07s0005g00030.t01	Wine grape	cytosol	37.67	39.25

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:100260869
wikigene:100260869	MapMan:18.8.1.5	Gene3D:3.40.30.10	UniProt:A5AJY2	EMBL:AM428484	ProteinID:CAN69111
ProteinID:CAN69111.1	ProteinID:CBI18904	ProteinID:CBI18904.3	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824
GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	EntrezGene:LOC100260869	wikigene:LOC100260869	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	SUPFAM:SSF47616	SUPFAM:SSF52833	TIGR:TC56293	InterPro:Thioredoxin-like_sf
UniParc:UPI000151ECD7	ArrayExpress:VIT_18s0001g00690	EnsemblPlantsGene:VIT_18s0001g00690	EnsemblPlants:VIT_18s0001g00690.t01	unigene:Vvi.6839	RefSeq:XP_002285906
RefSeq:XP_002285906.1	RefSeq:XP_019071736.1	:	:	:	:

Description

No Description!

Coordinates

chr18:-:1461096..1462270

Molecular Weight (calculated)

25202.3 Da

IEP (calculated)

9.260

GRAVY (calculated)

-0.467

Length

223 amino acids

Sequence
(BLAST)

001: MATPVKVYGP PMSTAVSRVL ACLLEKDVNF QLIPVDMSKG EHKKPDYLKI QPFGQVPSFQ DESISLFESR AICRYVSEKY ANQGNKRLYG TNPLEKASIE
101: QWLEAEGQSF NPPSSALVFQ LAFAPRMKLK QDLGVIKQSE EKLAKVLDVY EQRLGESRFL AGDEFTLADL SHLPNTQYLV SVTEKGEMFT KRKNVGRWWS
201: EISGRDSWKK VVDLQKAPPP KSA

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.