Factsheet for VIT_07s0104g01820.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0104g01830.t01	Wine grape	cytosol	52.07	52.56
VIT_07s0005g00010.t01	Wine grape	cytosol	48.39	49.07
VIT_07s0005g00030.t01	Wine grape	cytosol	48.39	49.07
VIT_04s0079g00690.t01	Wine grape	mitochondrion	41.47	42.25
VIT_07s0104g01800.t01	Wine grape	cytosol	41.94	41.94
VIT_07s0104g01810.t01	Wine grape	cytosol	41.94	41.94
VIT_12s0028g00920.t01	Wine grape	cytosol	40.55	40.93
VIT_18s0001g00690.t01	Wine grape	cytosol	40.09	39.01
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	38.25	38.43
VIT_04s0079g00710.t01	Wine grape	cytosol	37.33	38.03

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:100249365
wikigene:100249365	MapMan:18.8.1.5	Gene3D:3.40.30.10	ProteinID:CCB56741	ProteinID:CCB56741.1	UniProt:F6HPY5
EMBL:FN596005	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EntrezGene:LOC100249365	wikigene:LOC100249365
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00015CA9B5	ArrayExpress:VIT_07s0104g01820	EnsemblPlantsGene:VIT_07s0104g01820
EnsemblPlants:VIT_07s0104g01820.t01	RefSeq:XP_002268146	RefSeq:XP_002268146.1	:	:	:

Description

No Description!

Coordinates

chr7:+:2815956..2816813

Molecular Weight (calculated)

24197.2 Da

IEP (calculated)

6.517

GRAVY (calculated)

-0.087

Length

217 amino acids

Sequence
(BLAST)

001: MAVRKVYGSL DSPATLKVLA CLFEHHLDFE FVPVDISASD NRKKPFLNMS PFGQVPVFED GGYTQFESRA IVRSMGHQYG KKGEELVFWN SQKQAVVSNW
101: IDVEDHKFEP PALELISELL TKPGNGLAPD LAVVAKAEAQ LAKVLDVYEA RLAEFKYLAA DNYTIADVLH LPNLQALMET PAKKLIESRA RVSAWCSDIL
201: ARPAWAKVVE MKLKAHA

Best Arabidopsis Sequence Match ( AT4G02520.1 )
(BLAST)

001: MAGIKVFGHP ASIATRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLQTD SKNISQYAIM
101: AIGMQVEDHQ FDPVASKLAF EQIFKSIYGL TTDEAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPAIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VQ

Arabidopsis Description

GSTF2Glutathione S-transferase F2 [Source:UniProtKB/Swiss-Prot;Acc:P46422]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.