Factsheet for TraesCS1B01G113600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G094800.1	Wheat	endoplasmic reticulum, extracellular	92.86	92.86
TraesCS1B01G113500.1	Wheat	endoplasmic reticulum	86.16	86.94
TraesCS7B01G084400.1	Wheat	endoplasmic reticulum	81.25	81.25
TraesCS1B01G114400.1	Wheat	cytosol	67.41	79.47
TraesCS1B01G113700.1	Wheat	endoplasmic reticulum	78.12	78.48
KXG21305	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.54	73.83
Zm00001d024839_P001	Maize	extracellular	70.54	70.85
EES17708	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.54	69.91
Zm00001d010870_P001	Maize	extracellular	69.64	66.67
TraesCS5B01G020700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.71	61.26
TraesCS5B01G021800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.71	61.26
TraesCS5B01G021100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.27	56.72
GSMUA_Achr2P02330_001	Banana	cytosol	53.12	55.09
TraesCS3B01G334500.1	Wheat	cytosol	51.79	54.72
TraesCS1B01G113800.1	Wheat	cytosol	54.02	53.54
TraesCS1B01G114300.1	Wheat	endoplasmic reticulum, extracellular	53.57	53.1
TraesCS5B01G020900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.91	52.79
TraesCS1B01G097400.1	Wheat	cytosol	51.34	52.51
TraesCS5B01G435000.1	Wheat	cytosol	50.89	52.29
TraesCS7B01G398800.1	Wheat	cytosol	41.52	52.25
TraesCS2B01G420800.1	Wheat	cytosol	50.0	51.61
TraesCS1B01G097200.1	Wheat	cytosol	50.45	51.6
TraesCS7B01G096300.1	Wheat	cytosol	50.0	51.14
VIT_07s0104g01800.t01	Wine grape	cytosol	49.11	50.69
TraesCS3B01G334300.1	Wheat	cytosol	48.66	50.0
KRH31902	Soybean	cytosol	47.77	49.08
TraesCS4B01G059300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.55	48.47
VIT_07s0104g01810.t01	Wine grape	cytosol	46.88	48.39
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.88	47.95
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.88	47.95
TraesCS7B01G443300.1	Wheat	cytosol	46.43	47.93
KRH71551	Soybean	cytosol	46.88	47.73
CDX93963	Canola	cytosol	45.98	47.03
AT3G62760.1	Thale cress	cytosol	45.09	46.12
TraesCS3B01G152300.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.0	43.24
TraesCS3B01G152200.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.0	43.24
TraesCS1B01G019400.1	Wheat	cytosol	23.21	42.98
TraesCS5B01G259700.1	Wheat	mitochondrion	50.0	40.73
TraesCS3B01G490400.1	Wheat	cytosol	39.29	39.29
TraesCS4B01G331100.1	Wheat	endoplasmic reticulum, peroxisome	37.95	37.61
TraesCS4B01G059100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.21	36.61
TraesCS3B01G490600.3	Wheat	golgi	37.05	36.24
TraesCS4B01G330900.1	Wheat	cytosol	30.36	30.49
TraesCS4B01G331000.1	Wheat	cytosol, plastid	31.7	28.74
TraesCS1B01G217700.1	Wheat	cytosol	30.8	26.54
TraesCS4B01G330800.1	Wheat	cytosol, nucleus, peroxisome	30.8	21.23
TraesCS3B01G068300.1	Wheat	cytosol	31.25	9.0
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF17	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS1B01G113600	EnsemblPlants:TraesCS1B01G113600.1	TIGR:cd03053	TIGR:cd03187

Description

No Description!

Coordinates

chr1B:+:133032492..133033247

Molecular Weight (calculated)

24888.9 Da

IEP (calculated)

5.805

GRAVY (calculated)

-0.114

Length

224 amino acids

Sequence
(BLAST)

001: MAPEVKVYGW AVSPFVARPL LCLEEANVDY ELVPMSREAG DHRHPDFLAR NPFGQVPVLE DGNLTLFESR AIARHVLRKH KPELLGSGSP ESTAMVDVWL
101: EVEAHQHHPA AAAIFVQCIV SPLLGGAPDQ AVVDENVSKL RKVLEVYEAR LSASRYLAGG DISLADLSHF PIMRYFMQTE YASMVEELPH VNAWWEGLKA
201: RPTARKVAEF MPPDLGLGKK AEQL

Best Arabidopsis Sequence Match ( AT1G02930.1 )
(BLAST)

001: MAGIKVFGHP ASTATRRVLI ALHEKNVDFE FVHVELKDGE HKKEPFILRN PFGKVPAFED GDFKIFESRA ITQYIAHEFS DKGNNLLSTG KDMAIIAMGI
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL

Arabidopsis Description

GSTF6Glutathione S-transferase F6 [Source:UniProtKB/Swiss-Prot;Acc:P42760]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.