Factsheet for TraesCS5B01G020900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G020700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.83	83.78
TraesCS5B01G021800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.83	83.78
HORVU5Hr1G006630.2	Barley	cytosol	77.25	78.26
TraesCS5B01G021100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	76.39	74.79
EES02961	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.24	68.47
Zm00001d043344_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.09	65.62
Os01t0369700-03	Rice	cytosol	66.95	65.0
Os01t0353400-00	Rice	cytosol	56.22	60.37
TraesCS1B01G113700.1	Wheat	endoplasmic reticulum	55.36	57.85
TraesCS1B01G113500.1	Wheat	endoplasmic reticulum	54.08	56.76
TraesCS1B01G113600.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.79	54.91
TraesCS7B01G096300.1	Wheat	cytosol	51.07	54.34
TraesCS7B01G084400.1	Wheat	endoplasmic reticulum	51.93	54.02
TraesCS1B01G097400.1	Wheat	cytosol	50.64	53.88
TraesCS1B01G097200.1	Wheat	cytosol	49.36	52.51
TraesCS1B01G114400.1	Wheat	cytosol	41.2	50.53
TraesCS3B01G334500.1	Wheat	cytosol	45.92	50.47
TraesCS2B01G420800.1	Wheat	cytosol	45.92	49.31
GSMUA_Achr2P02330_001	Banana	cytosol	44.64	48.15
TraesCS5B01G435000.1	Wheat	cytosol	44.21	47.25
TraesCS7B01G398800.1	Wheat	cytosol	36.05	47.19
TraesCS1B01G114300.1	Wheat	endoplasmic reticulum, extracellular	45.49	46.9
TraesCS3B01G334300.1	Wheat	cytosol	43.35	46.33
TraesCS1B01G113800.1	Wheat	cytosol	44.64	46.02
TraesCS4B01G059300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.64	45.41
TraesCS7B01G443300.1	Wheat	cytosol	42.06	45.16
VIT_07s0104g01800.t01	Wine grape	cytosol	39.91	42.86
VIT_07s0104g01810.t01	Wine grape	cytosol	39.48	42.4
TraesCS1B01G019400.1	Wheat	cytosol	21.89	42.15
KRH31902	Soybean	cytosol	38.2	40.83
TraesCS3B01G152200.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.06	40.54
TraesCS3B01G152300.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.06	40.54
KRH71551	Soybean	cytosol	37.77	40.0
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.76	36.99
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.76	36.99
CDX93963	Canola	cytosol	34.33	36.53
AT3G62760.1	Thale cress	cytosol	33.91	36.07
TraesCS5B01G259700.1	Wheat	mitochondrion	42.49	36.0
TraesCS4B01G059100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.35	34.24
TraesCS3B01G490400.1	Wheat	cytosol	30.04	31.25
TraesCS3B01G490600.3	Wheat	golgi	30.04	30.57
TraesCS4B01G330900.1	Wheat	cytosol	27.47	28.7
TraesCS4B01G331100.1	Wheat	endoplasmic reticulum, peroxisome	26.61	27.43
TraesCS4B01G331000.1	Wheat	cytosol, plastid	26.61	25.1
TraesCS1B01G217700.1	Wheat	cytosol	25.32	22.69
TraesCS4B01G330800.1	Wheat	cytosol, nucleus, peroxisome	27.9	20.0
TraesCS3B01G068300.1	Wheat	cytosol	25.75	7.71
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF13	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS5B01G020900	EnsemblPlants:TraesCS5B01G020900.1	TIGR:cd03187	:

Description

No Description!

Coordinates

chr5B:+:20036844..20048610

Molecular Weight (calculated)

26463.0 Da

IEP (calculated)

5.899

GRAVY (calculated)

-0.037

Length

233 amino acids

Sequence
(BLAST)

001: MAPMKVYGWA VSPWMARVLV CLEEAGAEYE LVSMSRNGGD HRRPEHLARN SLSEIPVLED GDLTLYRGRY VFQFKLSKWS SDMPELLGAG SLEESAMVDV
101: WADADAHQLE PILKPIVFNC IIHPFIGMDI DQGLIDESVE KLKKLLEVYE ARLSSNKYLA GDFVSFADLT HFFFMRYFMA TEHAVVLDAY PHAKAWWDAL
201: LARPSVKKVI AGMPPNFRFG RKLIVSGYLR ENS

Best Arabidopsis Sequence Match ( AT3G62760.1 )
(BLAST)

001: MAMKLYGDEM SACVARVLLC LHEKNTEFEL VPVNLFACHH KLPSFLSMNP FGKVPALQDD DLTLFESRAI TAYIAEKHRD KGTDLTRHED PKEAAIVKLW
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN

Arabidopsis Description

GSTF13Glutathione S-transferase F13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.