Factsheet for Bra008570.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69395	Canola	cytosol	100.0	100.0
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	90.14	89.3
AT5G17220.1	Thale cress	cytosol	84.51	84.11
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	69.01	70.0
VIT_04s0079g00690.t01	Wine grape	mitochondrion	58.22	58.22
KRH30892	Soybean	cytosol	54.93	54.93
KRG97999	Soybean	cytosol	54.46	54.46
VIT_04s0079g00710.t01	Wine grape	cytosol	53.05	53.05
GSMUA_Achr4P11730_001	Banana	cytosol	51.64	49.77
PGSC0003DMT400043105	Potato	cytosol, endoplasmic reticulum	47.89	44.35
Solyc02g081340.2.1	Tomato	cytosol, endoplasmic reticulum	47.42	43.91
Bra036259.1-P	Field mustard	cytosol, mitochondrion	43.66	43.66
Bra000875.1-P	Field mustard	cytosol	43.19	43.19
Bra021673.1-P	Field mustard	cytosol, mitochondrion	42.72	42.33
Bra000876.1-P	Field mustard	cytosol, mitochondrion	42.25	42.25
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.19	42.01
Bra022815.1-P	Field mustard	cytosol	42.25	41.86
Bra022816.1-P	Field mustard	endoplasmic reticulum	41.78	41.4
Bra018543.1-P	Field mustard	cytosol, mitochondrion	40.38	40.38
Bra036260.1-P	Field mustard	cytosol, mitochondrion	40.38	40.38
Bra033358.1-P	Field mustard	cytosol, mitochondrion	39.44	40.0
Bra030515.1-P	Field mustard	cytosol, mitochondrion	38.97	39.52
Bra004434.1-P	Field mustard	cytosol	37.09	39.5
Bra000460.1-P	Field mustard	cytosol	38.03	37.67
Bra024517.1-P	Field mustard	cytosol	30.52	36.52
Bra033359.1-P	Field mustard	endoplasmic reticulum	40.38	34.68
Bra032578.1-P	Field mustard	cytosol	39.44	34.57
Bra037204.1-P	Field mustard	cytosol	39.91	33.46
Bra033361.1-P	Field mustard	cytosol	27.23	31.02
GSMUA_Achr4P04940_001	Banana	cytosol	48.36	22.59
Bra033360.1-P	Field mustard	endoplasmic reticulum	0.94	1.02

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EnsemblPlantsGene:Bra008570	EnsemblPlants:Bra008570.1	EnsemblPlants:Bra008570.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4CWH3	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF18	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0001B63C16	SEG:seg	:	:	:	:

Description

AT5G17220 (E=4e-094) ATGSTF12, GST26, TT19 | ATGSTF12 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12); glutathione transferase

Coordinates

chrA10:-:12872918..12873717

Molecular Weight (calculated)

24566.1 Da

IEP (calculated)

6.038

GRAVY (calculated)

-0.083

Length

213 amino acids

Sequence
(BLAST)

001: MVVKLYGQVT AACPQRVLLC LLEKEIEFEI IHIDLDTLEQ KRPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKYAD QGTNLLGKSL EHRAIVDQWA
101: DVEVGYFNVL VHPLVMNLVI KPRLGEECDA VLVEELKVKL GVVLDIYENQ LASNRFLAGD EFTMADLTHM PAMGYLMRTN INRIVKDRVN MNRWWEEVTA
201: RPAWKKLMKM AGF

Best Arabidopsis Sequence Match ( AT5G17220.1 )
(BLAST)

001: MVVKLYGQVT AACPQRVLLC FLEKGIEFEI IHIDLDTFEQ KKPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKFAD QGTNLLGKSL EHRAIVDQWA
101: DVETYYFNVL AQPLVINLII KPRLGEKCDV VLVEDLKVKL GVVLDIYNNR LSSNRFLAGE EFTMADLTHM PAMGYLMSIT DINQMVKARG SFNRWWEEIS
201: DRPSWKKLMV LAGH

Arabidopsis Description

GSTF12Glutathione S-transferase F12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.