Factsheet for Bra037204.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012351.1-P
Bra024548.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G49860.1	Bra012351.1-P	AT1G22920.1	21798944
AT1G49860.1	Bra024548.1-P	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37204	Canola	cytosol	100.0	100.0
AT1G49860.1	Thale cress	cytosol	75.2	75.2
Bra000876.1-P	Field mustard	cytosol, mitochondrion	40.16	47.89
Bra030515.1-P	Field mustard	cytosol, mitochondrion	39.37	47.62
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.94	47.49
Bra036260.1-P	Field mustard	cytosol, mitochondrion	39.76	47.42
Bra036259.1-P	Field mustard	cytosol, mitochondrion	39.76	47.42
Bra033358.1-P	Field mustard	cytosol, mitochondrion	38.98	47.14
Bra004434.1-P	Field mustard	cytosol	36.61	46.5
Bra018543.1-P	Field mustard	cytosol, mitochondrion	38.98	46.48
Bra000875.1-P	Field mustard	cytosol	38.19	45.54
Bra024517.1-P	Field mustard	cytosol	31.89	45.51
Bra000460.1-P	Field mustard	cytosol	37.8	44.65
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	34.65	41.9
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	34.65	40.93
Bra008570.1-P	Field mustard	cytosol	33.46	39.91
Bra032578.1-P	Field mustard	cytosol	37.01	38.68
Bra033361.1-P	Field mustard	cytosol	28.35	38.5
Bra033359.1-P	Field mustard	endoplasmic reticulum	37.4	38.31
Bra022816.1-P	Field mustard	endoplasmic reticulum	31.89	37.67
Bra022815.1-P	Field mustard	cytosol	31.5	37.21
Bra021673.1-P	Field mustard	cytosol, mitochondrion	31.5	37.21
Bra033360.1-P	Field mustard	endoplasmic reticulum	2.36	3.05

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EnsemblPlantsGene:Bra037204	EnsemblPlants:Bra037204.1	EnsemblPlants:Bra037204.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4F7Z3	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002541C23	:	:	:	:	:

Description

AT1G49860 (E=7e-110) ATGSTF14 | ATGSTF14; glutathione transferase

Coordinates

chrA09:+:3952707..3954633

Molecular Weight (calculated)

29135.2 Da

IEP (calculated)

4.935

GRAVY (calculated)

-0.272

Length

254 amino acids

Sequence
(BLAST)

001: MEDQKMKLHC GFIFSNWTAM FGLHEKSLDF ELVFVDWVAG EARTKTFLSN LNPFGQVPVL EDGDLKLFES KAITRYLAEQ YKDVGTDLLP NDAKERAIVS
101: MWMEIDTNQF LPLASTLIRE LVTKPYQGLA TDFTSVQENK EKLSEVLNIY EARLGESCYL AGESFTLADL HHLPPIHYML KMEEEGVKDL IYSRPNVTAW
201: VEKMQSRPAW LKTVVKGDHI FELMKQRRMP MQLDSPCQEV TGLAQKTAMV TENT

Best Arabidopsis Sequence Match ( AT1G49860.1 )
(BLAST)

001: MADSKMKLHC GFIWGNSAAL FCINEKGLDF ELVFVDWLAG EAKTKTFLST LNPFGEVPVL EDGDLKLFEP KAITRYLAEQ YKDVGTNLLP DDPKKRAIMS
101: MWMEVDSNQF LPIASTLIKE LIINPYQGLA TDDTAVQENK EKLSEVLNIY ETRLGESPYL AGESFSLADL HHLAPIDYLL NTDEEELKNL IYSRPNVAAW
201: VEKMKMRPAW LKTVVMKNHI VDLMKQRRLP IKLDSSCHES TVVAQKNAIA IENK

Arabidopsis Description

GSTF14Glutathione S-transferase F14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6C8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.