Factsheet for Bra030515.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra030515.1-P
Bra033358.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G02930.1	Bra030515.1-P	AT1G02920.1	21798944
AT1G02930.1	Bra033358.1-P	AT1G02920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15444	Canola	cytosol, mitochondrion	100.0	100.0
Bra033358.1-P	Field mustard	cytosol, mitochondrion	96.19	96.19
AT1G02930.1	Thale cress	cytosol	82.86	83.65
AT1G02920.1	Thale cress	cytosol	81.9	82.3
Bra018543.1-P	Field mustard	cytosol, mitochondrion	80.0	78.87
Bra036259.1-P	Field mustard	cytosol, mitochondrion	76.19	75.12
Bra000876.1-P	Field mustard	cytosol, mitochondrion	75.24	74.18
Bra036260.1-P	Field mustard	cytosol, mitochondrion	74.76	73.71
Bra000875.1-P	Field mustard	cytosol	72.38	71.36
Solyc06g009020.2.1	Tomato	plastid	61.9	61.03
VIT_07s0005g00010.t01	Wine grape	cytosol	61.9	60.75
PGSC0003DMT400037918	Potato	cytosol	61.43	60.56
VIT_07s0005g00030.t01	Wine grape	cytosol	60.48	59.35
Solyc06g009040.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.52	58.96
PGSC0003DMT400029561	Potato	cytosol	60.0	58.88
Solyc09g074850.2.1	Tomato	cytosol	53.81	56.5
Bra000460.1-P	Field mustard	cytosol	57.14	55.81
Bra004434.1-P	Field mustard	cytosol	52.86	55.5
Bra024517.1-P	Field mustard	cytosol	45.24	53.37
Bra032578.1-P	Field mustard	cytosol	58.1	50.21
Bra033361.1-P	Field mustard	cytosol	41.9	47.06
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.19	44.29
Bra033359.1-P	Field mustard	endoplasmic reticulum	49.52	41.94
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	40.95	40.95
Bra021673.1-P	Field mustard	cytosol, mitochondrion	40.95	40.0
Bra037204.1-P	Field mustard	cytosol	47.62	39.37
Bra022815.1-P	Field mustard	cytosol	40.0	39.07
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	40.0	39.07
Bra008570.1-P	Field mustard	cytosol	39.52	38.97
Bra022816.1-P	Field mustard	endoplasmic reticulum	35.71	34.88
Bra033360.1-P	Field mustard	endoplasmic reticulum	2.38	2.54

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EnsemblPlantsGene:Bra030515	EnsemblPlants:Bra030515.1	EnsemblPlants:Bra030515.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4ENZ5	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002545AA8	SEG:seg	:	:	:	:

Description

AT1G02930 (E=5e-092) ATGSTF6, GST1, ERD11, ATGSTF3, GSTF6 | ATGSTF6 (GLUTATHIONE S-TRANSFERASE); copper ion binding / glutathione binding / glutathione transferase

Coordinates

chrA08:+:21501199..21502012

Molecular Weight (calculated)

23692.4 Da

IEP (calculated)

6.350

GRAVY (calculated)

-0.262

Length

210 amino acids

Sequence
(BLAST)

001: MAGIKVFGHP ASTATRRVLI ALHEKDLDFE LVHVELKDGE HKKEPFLSRN PFGKVPAFED GDFKLFESRA ITQYIAHEYA DKGNQLLSPG SKNMAILAMG
101: MEIEAHEFDS VASKLGWEQI FKNFFGLTTD QAVVKEEEVK LGKVLDNYEA RLGESKYLAS DHFTLVDLHH IPVIQYLLGT PTKKLFEERP HVSAWVADIT
201: SRPSSQKILL

Best Arabidopsis Sequence Match ( AT1G02930.1 )
(BLAST)

001: MAGIKVFGHP ASTATRRVLI ALHEKNVDFE FVHVELKDGE HKKEPFILRN PFGKVPAFED GDFKIFESRA ITQYIAHEFS DKGNNLLSTG KDMAIIAMGI
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL

Arabidopsis Description

GSTF6Glutathione S-transferase F6 [Source:UniProtKB/Swiss-Prot;Acc:P42760]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.