Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G02920.1 | Thale cress | cytosol | 93.75 | 93.3 |
| CDY15444 | Canola | cytosol, mitochondrion | 83.65 | 82.86 |
| Bra030515.1-P | Field mustard | cytosol, mitochondrion | 83.65 | 82.86 |
| CDY18131 | Canola | cytosol, mitochondrion | 82.21 | 81.43 |
| CDX89931 | Canola | cytosol, mitochondrion | 82.21 | 81.43 |
| Bra033358.1-P | Field mustard | cytosol, mitochondrion | 82.21 | 81.43 |
| AT2G02930.1 | Thale cress | cytosol, mitochondrion | 74.52 | 73.11 |
| AT4G02520.1 | Thale cress | cytosol, mitochondrion | 73.56 | 72.17 |
| Solyc06g009040.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 59.62 | 58.49 |
| Solyc06g009020.2.1 | Tomato | plastid | 59.62 | 58.22 |
| PGSC0003DMT400037918 | Potato | cytosol | 59.13 | 57.75 |
| VIT_07s0005g00010.t01 | Wine grape | cytosol | 58.65 | 57.01 |
| VIT_07s0005g00030.t01 | Wine grape | cytosol | 58.17 | 56.54 |
| PGSC0003DMT400029561 | Potato | cytosol | 57.69 | 56.07 |
| Solyc09g074850.2.1 | Tomato | cytosol | 50.48 | 52.5 |
| AT1G02950.5 | Thale cress | cytosol | 57.69 | 47.06 |
| AT3G62760.1 | Thale cress | cytosol | 45.19 | 42.92 |
| AT2G47730.2 | Thale cress | plastid | 53.85 | 42.59 |
| AT3G03190.1 | Thale cress | cytosol | 40.87 | 39.72 |
| AT2G30860.1 | Thale cress | cytosol | 39.42 | 38.14 |
| AT5G17220.1 | Thale cress | cytosol | 38.46 | 37.38 |
| AT1G02940.2 | Thale cress | endoplasmic reticulum | 50.48 | 37.37 |
| AT2G30870.1 | Thale cress | endoplasmic reticulum, vacuole | 37.98 | 36.74 |
| AT1G49860.1 | Thale cress | cytosol | 44.23 | 36.22 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | EntrezGene:839515 | UniProt:A0A178WN35 | ProteinID:AAF02873.1 | ProteinID:AEE27497.1 | ProteinID:AEE27498.1 |
| ArrayExpress:AT1G02930 | EnsemblPlantsGene:AT1G02930 | RefSeq:AT1G02930 | TAIR:AT1G02930 | RefSeq:AT1G02930-TAIR-G | EnsemblPlants:AT1G02930.1 |
| TAIR:AT1G02930.1 | Symbol:ATGSTF6 | EMBL:AY050332 | EMBL:AY097392 | ProteinID:CAA72413.1 | EMBL:D17672 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005773 | GO:GO:0005829 | GO:GO:0006749 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0006979 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009414 | GO:GO:0009506 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009636 | GO:GO:0009651 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0019748 | GO:GO:0030312 | GO:GO:0042742 | GO:GO:0043295 | GO:GO:0046686 |
| GO:GO:0050897 | GO:GO:2001147 | GO:GO:2001227 | Symbol:GSTF6 | InterPro:GST_C | InterPro:GST_Phi_C |
| InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | EMBL:L12057 |
| RefSeq:NP_001184893.1 | RefSeq:NP_171792.1 | ProteinID:OAP18953.1 | UniProt:P42760 | PFAM:PF00043 | PFAM:PF02798 |
| PO:PO:0000005 | PO:PO:0000293 | PO:PO:0001170 | PO:PO:0007131 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009025 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF7 | SUPFAM:SSF47616 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI0000000BB7 | SEG:seg | : | : |
Description
GSTF6Glutathione S-transferase F6 [Source:UniProtKB/Swiss-Prot;Acc:P42760]
Coordinates
chr1:-:661088..662475
Molecular Weight (calculated)
23487.2 Da
IEP (calculated)
6.177
GRAVY (calculated)
-0.219
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGIKVFGHP ASTATRRVLI ALHEKNVDFE FVHVELKDGE HKKEPFILRN PFGKVPAFED GDFKIFESRA ITQYIAHEFS DKGNNLLSTG KDMAIIAMGI
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.