CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46009	Soybean	cytosol	97.67	97.67
KRG98977	Soybean	cytosol	77.67	92.78
KRH46010	Soybean	cytosol	76.74	76.39
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	73.49	73.15
VIT_12s0028g00920.t01	Wine grape	cytosol	71.63	71.63
KRG98975	Soybean	cytosol	62.79	71.43
KRH73614	Soybean	endoplasmic reticulum	69.3	69.3
KRH14517	Soybean	endoplasmic reticulum	69.3	69.3
KRH14516	Soybean	cytosol	42.79	67.65
KRH73613	Soybean	cytosol	48.84	63.25
CDX97788	Canola	cytosol	61.4	61.4
CDY29636	Canola	cytosol	61.4	61.4
CDX84816	Canola	cytosol	60.93	60.93
CDY23980	Canola	cytosol	60.93	60.93
Bra022815.1-P	Field mustard	cytosol	60.93	60.93
Bra021673.1-P	Field mustard	cytosol, mitochondrion	60.47	60.47
AT2G30860.1	Thale cress	cytosol	60.0	60.0
AT2G30870.1	Thale cress	endoplasmic reticulum, vacuole	59.53	59.53
CDY23979	Canola	endoplasmic reticulum	59.53	59.53
CDX84815	Canola	cytosol, endoplasmic reticulum	59.53	59.53
Bra022816.1-P	Field mustard	endoplasmic reticulum	59.53	59.53
KRG97999	Soybean	cytosol	57.21	57.75
KRH30892	Soybean	cytosol	56.28	56.81
KRH71551	Soybean	cytosol	46.51	45.45
KRH31902	Soybean	cytosol	45.58	44.95
KRH71552	Soybean	cytosol	42.33	41.74

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:100499911
MapMan:18.8.1.5	Gene3D:3.40.30.10	MapMan:9.5.1.6.4	EMBL:ACUP02010948	EnsemblPlantsGene:GLYMA_18G111200	GO:GO:0003674
GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
UniProt:I1N104	InterPro:IPR004045	InterPro:IPR010987	EMBL:KM818405	EnsemblPlants:KRG98976	ProteinID:KRG98976
ProteinID:KRG98976.1	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900
PANTHER:PTHR43900:SF15	MetaCyc:PWY-4061	MetaCyc:PWY-6842	MetaCyc:PWY-7112	MetaCyc:PWY-7533	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00023DB523	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:13177885..13180001

Molecular Weight (calculated)

24890.9 Da

IEP (calculated)

5.969

GRAVY (calculated)

-0.353

Length

215 amino acids

Sequence
(BLAST)

001: MLVKVYGPTY GAPKRVLVCL IEKEIEFETV HIDLFKGENK EPEFLKLQPF GSLPVIQDGD YTLYESRAII RYFAEKYKDQ GTDLLGKTIE EKGLVEQWLE
101: VEAHNFHPPL YNLVINVLFA PLTGAPSDQK VIEESDKKIE KVLDVYEERL SKSKYLAGDF FSLADLSHLP FGHYLVNQTG RGNLVRERKH VSAWWDDISN
201: RPAWQKVLQL YKYPV

Best Arabidopsis Sequence Match ( AT2G30860.1 )
(BLAST)

001: MVLKVYGPHF ASPKRALVTL IEKGVAFETI PVDLMKGEHK QPAYLALQPF GTVPAVVDGD YKIFESRAVM RYVAEKYRSQ GPDLLGKTVE DRGQVEQWLD
101: VEATTYHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA GVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETVAK YSFPA

Arabidopsis Description

GSTF9GSTF9 [Source:UniProtKB/TrEMBL;Acc:A0A178VP05]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.