CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98976	Soybean	cytosol, endoplasmic reticulum, mitochondrion	97.67	97.67
KRG98977	Soybean	cytosol	78.6	93.89
KRH46010	Soybean	cytosol	77.21	76.85
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	73.95	73.61
VIT_12s0028g00920.t01	Wine grape	cytosol	71.63	71.63
KRG98975	Soybean	cytosol	62.79	71.43
KRH73614	Soybean	endoplasmic reticulum	70.23	70.23
KRH14517	Soybean	endoplasmic reticulum	69.77	69.77
KRH14516	Soybean	cytosol	42.33	66.91
KRH73613	Soybean	cytosol	49.77	64.46
CDX97788	Canola	cytosol	63.26	63.26
CDY29636	Canola	cytosol	63.26	63.26
CDX84816	Canola	cytosol	62.79	62.79
CDY23980	Canola	cytosol	62.79	62.79
Bra022815.1-P	Field mustard	cytosol	62.79	62.79
Bra021673.1-P	Field mustard	cytosol, mitochondrion	62.33	62.33
AT2G30860.1	Thale cress	cytosol	61.86	61.86
AT2G30870.1	Thale cress	endoplasmic reticulum, vacuole	61.4	61.4
CDY23979	Canola	endoplasmic reticulum	61.4	61.4
CDX84815	Canola	cytosol, endoplasmic reticulum	61.4	61.4
Bra022816.1-P	Field mustard	endoplasmic reticulum	61.4	61.4
KRG97999	Soybean	cytosol	57.21	57.75
KRH30892	Soybean	cytosol	56.74	57.28
KRH71551	Soybean	cytosol	46.51	45.45
KRH31902	Soybean	cytosol	46.05	45.41
KRH71552	Soybean	cytosol	41.4	40.83

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EntrezGene:547589	MapMan:9.5.1.6.4	EMBL:ACUP02005303	EMBL:BT089130	UniProt:C6SVD7
EnsemblPlantsGene:GLYMA_08G306800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EMBL:KM818399	EnsemblPlants:KRH46009
ProteinID:KRH46009	ProteinID:KRH46009.1	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR43900	PANTHER:PTHR43900:SF15	MetaCyc:PWY-4061	MetaCyc:PWY-6842	MetaCyc:PWY-7112	MetaCyc:PWY-7533
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000189D49C	:	:

Description

hypothetical protein

Coordinates

chr8:-:42481971..42483825

Molecular Weight (calculated)

24830.8 Da

IEP (calculated)

5.968

GRAVY (calculated)

-0.360

Length

215 amino acids

Sequence
(BLAST)

001: MVVKVYGPTY GSPKRVLVCL IEKEIEFETV HVDLFKGENK EPEFLKLQPF GSLPVIQDGD YTLYESRAII RYLAEKYKDQ GTDLLGKTIE EKGLVEQWLE
101: VEAHNFHPPL YNLVINVLFA PLTGAPSDQK VIEESDKKIE KVLDVYEERL SKSKYLAGDF FSLADLSHLP FGHYLVNQTG RGNLVRDRKH VSAWWDDISN
201: RPAWQKVLQL YKYPV

Best Arabidopsis Sequence Match ( AT2G30860.1 )
(BLAST)

001: MVLKVYGPHF ASPKRALVTL IEKGVAFETI PVDLMKGEHK QPAYLALQPF GTVPAVVDGD YKIFESRAVM RYVAEKYRSQ GPDLLGKTVE DRGQVEQWLD
101: VEATTYHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA GVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETVAK YSFPA

Arabidopsis Description

GSTF9GSTF9 [Source:UniProtKB/TrEMBL;Acc:A0A178VP05]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.