Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10406 | Soybean | nucleus | 91.21 | 64.34 |
| KRH22939 | Soybean | nucleus | 90.6 | 63.64 |
| GSMUA_Achr3P25910_001 | Banana | cytosol | 64.47 | 57.83 |
| VIT_06s0004g03360.t01 | Wine grape | plastid | 81.2 | 55.98 |
| CDX99865 | Canola | plastid | 77.41 | 54.99 |
| Solyc06g075340.2.1 | Tomato | plastid | 79.61 | 54.56 |
| Bra032344.1-P | Field mustard | plastid | 77.78 | 54.17 |
| CDY26307 | Canola | plastid | 77.66 | 54.08 |
| PGSC0003DMT400019412 | Potato | plastid | 79.12 | 54.05 |
| Zm00001d044250_P001 | Maize | plastid | 76.19 | 53.42 |
| AT1G29900.1 | Thale cress | plastid | 77.41 | 53.41 |
| Zm00001d011192_P001 | Maize | plastid | 76.19 | 53.15 |
| Os01t0570700-01 | Rice | cytosol, plasma membrane, plastid | 21.0 | 52.76 |
| EES00939 | Sorghum | plastid | 75.34 | 52.69 |
| TraesCS3A01G206600.1 | Wheat | plastid | 74.97 | 52.39 |
| HORVU3Hr1G049610.1 | Barley | plastid | 74.85 | 52.3 |
| TraesCS3B01G238600.1 | Wheat | plastid | 74.85 | 52.3 |
| TraesCS3D01G209100.1 | Wheat | plastid | 74.85 | 52.3 |
Protein Annotations
| KEGG:00240+6.3.5.5 | KEGG:00250+6.3.5.5 | Gene3D:1.10.1030.10 | Gene3D:3.30.1490.20 | Gene3D:3.30.470.20 | Gene3D:3.40.50.1380 |
| Gene3D:3.40.50.20 | MapMan:35.1 | UniProt:A0A0R0EBC0 | EMBL:ACUP02012677 | InterPro:ATP-grasp | InterPro:ATP_grasp_subdomain_1 |
| InterPro:CarbamoylP_synth_lsu_oligo | InterPro:CarbamoylP_synth_lsu_oligo_sf | InterPro:CbamoylP_synth_lsu-like_ATP-bd | InterPro:CbamoylP_synth_lsu_CPSase_dom | ncoils:Coil | EnsemblPlantsGene:GLYMA_20G148800 |
| GO:GO:0000050 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004087 | GO:GO:0004088 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006526 | GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0046872 | InterPro:IPR011761 | InterPro:IPR013815 | InterPro:IPR036897 | InterPro:IPR036914 | EnsemblPlants:KRG91337 |
| ProteinID:KRG91337 | ProteinID:KRG91337.1 | InterPro:MGS-like_dom_sf | PFAM:PF02786 | PFAM:PF02787 | PRINTS:PR00098 |
| ScanProsite:PS00866 | ScanProsite:PS00867 | PFscan:PS50975 | PANTHER:PTHR11405 | PANTHER:PTHR11405:SF47 | MetaCyc:PWY-5154 |
| MetaCyc:PWY-5686 | MetaCyc:PWY-7400 | MetaCyc:PWY-7790 | MetaCyc:PWY-7791 | InterPro:PreATP-grasp_dom_sf | SMART:SM01096 |
| SUPFAM:SSF48108 | SUPFAM:SSF52335 | SUPFAM:SSF52440 | SUPFAM:SSF56059 | UniParc:UPI0006EDC719 | : |
Description
hypothetical protein
Coordinates
chr20:-:38740015..38743501
Molecular Weight (calculated)
89337.1 Da
IEP (calculated)
4.871
GRAVY (calculated)
0.084
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: CSNVAVAEPP APKLGKWTDI KKILILGAGP IVIGKACEFD YSGTQACKAL REEGNEVVLI NSNPATIMTG PETVDRTYIT PMTPDLVERS GTLEKYGVEL
101: IGAILDAIKK AEDRELFKQA MKNIGIKTPP SGIGTTLDEC LSIANDIGEY PLIVRPAFTL GGTGGGISYS IEGLLEICEA GIAASLTNQV LIEKSLMGWK
201: EYELEVMRDL TNNVVIICSI ENIDPMGVHT GDSITVAPAQ ILMDKEYQRL RDYSIAIIRE IGVECGGSNV QFAVNPENGE VMVIEMNSWV SRSSALIPRF
301: AFENFPGSLP ILTTQMKSVG EAMASIYAIY PAMKRGMQID EIFELSYIDK WFLTQFKELV DVESFLLSNN FSDLTNIDFY EVKKRGFSDK QIVFATKSIE
401: KEVHNKRLSL GVTPAYKRVD TCAAELEANT PYIYSSYDFE CESAPTTRKK VLILGGGPNR IGQGIEFDYC CCHASFALLI MTLVDRLYFK PLTVEDVLNI
501: IDLERLHGII VQLGGQTPLK LSFPLQQYLD EHKPACASGV GHIEHPKGGI ARSETDAPAT AADIGYPVVV RPSYVLGVEV DPEHPVLIDK YLSDACDIDV
601: DALADSQGNV VIGGIMEHIE QAGIHSGDSA CSIPTRTVPS SCLETIRSWT QNLVKQLNVR GLMNCQYAIT PSGDVFLLEA NPRASRTVPF VSKAIGHPLA
701: KYASLVMSGK ILYHLQFTKE VIPNYVSVKE AVLPFSKFPG CDVFLIPEMR STGEVMGIDP SYNIAFAKAQ IAAGQKLPLV GTVFLSLSDL TKPHLEKIAI
801: AFVENGFKIV ATSGTAHVL
101: IGAILDAIKK AEDRELFKQA MKNIGIKTPP SGIGTTLDEC LSIANDIGEY PLIVRPAFTL GGTGGGISYS IEGLLEICEA GIAASLTNQV LIEKSLMGWK
201: EYELEVMRDL TNNVVIICSI ENIDPMGVHT GDSITVAPAQ ILMDKEYQRL RDYSIAIIRE IGVECGGSNV QFAVNPENGE VMVIEMNSWV SRSSALIPRF
301: AFENFPGSLP ILTTQMKSVG EAMASIYAIY PAMKRGMQID EIFELSYIDK WFLTQFKELV DVESFLLSNN FSDLTNIDFY EVKKRGFSDK QIVFATKSIE
401: KEVHNKRLSL GVTPAYKRVD TCAAELEANT PYIYSSYDFE CESAPTTRKK VLILGGGPNR IGQGIEFDYC CCHASFALLI MTLVDRLYFK PLTVEDVLNI
501: IDLERLHGII VQLGGQTPLK LSFPLQQYLD EHKPACASGV GHIEHPKGGI ARSETDAPAT AADIGYPVVV RPSYVLGVEV DPEHPVLIDK YLSDACDIDV
601: DALADSQGNV VIGGIMEHIE QAGIHSGDSA CSIPTRTVPS SCLETIRSWT QNLVKQLNVR GLMNCQYAIT PSGDVFLLEA NPRASRTVPF VSKAIGHPLA
701: KYASLVMSGK ILYHLQFTKE VIPNYVSVKE AVLPFSKFPG CDVFLIPEMR STGEVMGIDP SYNIAFAKAQ IAAGQKLPLV GTVFLSLSDL TKPHLEKIAI
801: AFVENGFKIV ATSGTAHVL
0001: MRNHCLELSS NCSSIFASSK SNPRFSPSKL SYSTFFSRSA IYYRSKPKQA SSSSSFSTFP PCLNRKSSLT HVLKPVSELA DTTTKPFSPE IVGKRTDLKK
0101: IMILGAGPIV IGQACEFDYS GTQACKALRE EGYEVILINS NPATIMTDPE TANRTYIAPM TPELVEQVIE KERPDALLPT MGGQTALNLA VALAESGALE
0201: KYGVELIGAK LGAIKKAEDR ELFKDAMKNI GLKTPPSGIG TTLDECFDIA EKIGEFPLII RPAFTLGGTG GGIAYNKEEF ESICKSGLAA SATSQVLVEK
0301: SLLGWKEYEL EVMRDLADNV VIICSIENID PMGVHTGDSI TVAPAQTLTD REYQRLRDYS IAIIREIGVE CGGSNVQFAV NPVDGEVMII EMNPRVSRSS
0401: ALASKATGFP IAKMAAKLSV GYTLDQIPND ITRKTPASFE PSIDYVVTKI PRFAFEKFPG SQPLLTTQMK SVGESMALGR TFQESFQKAL RSLECGFSGW
0501: GCAKIKELDW DWDQLKYSLR VPNPDRIHAI YAAMKKGMKI DEIYELSMVD KWFLTQLKEL VDVEQYLMSG TLSEITKEDL YEVKKRGFSD KQIAFATKTT
0601: EEEVRTKRIS LGVVPSYKRV DTCAAEFEAH TPYMYSSYDV ECESAPNNKK KVLILGGGPN RIGQGIEFDY CCCHTSFALQ DAGYETIMLN SNPETVSTDY
0701: DTSDRLYFEP LTIEDVLNVI DLEKPDGIIV QFGGQTPLKL ALPIKHYLDK HMPMSLSGAG PVRIWGTSPD SIDAAEDRER FNAILDELKI EQPKGGIAKS
0801: EADALAIAKE VGYPVVVRPS YVLGGRAMEI VYDDSRLITY LENAVQVDPE RPVLVDKYLS DAIEIDVDTL TDSYGNVVIG GIMEHIEQAG VHSGDSACML
0901: PTQTIPASCL QTIRTWTTKL AKKLNVCGLM NCQYAITTSG DVFLLEANPR ASRTVPFVSK AIGHPLAKYA ALVMSGKSLK DLNFEKEVIP KHVSVKEAVF
1001: PFEKFQGCDV ILGPEMRSTG EVMSISSEFS SAFAMAQIAA GQKLPLSGTV FLSLNDMTKP HLEKIAVSFL ELGFKIVATS GTAHFLELKG IPVERVLKLH
1101: EGRPHAADMV ANGQIHLMLI TSSGDALDQK DGRQLRQMAL AYKVPVITTV AGALATAEGI KSLKSSAIKM TALQDFFEVK NVSSLLV
0101: IMILGAGPIV IGQACEFDYS GTQACKALRE EGYEVILINS NPATIMTDPE TANRTYIAPM TPELVEQVIE KERPDALLPT MGGQTALNLA VALAESGALE
0201: KYGVELIGAK LGAIKKAEDR ELFKDAMKNI GLKTPPSGIG TTLDECFDIA EKIGEFPLII RPAFTLGGTG GGIAYNKEEF ESICKSGLAA SATSQVLVEK
0301: SLLGWKEYEL EVMRDLADNV VIICSIENID PMGVHTGDSI TVAPAQTLTD REYQRLRDYS IAIIREIGVE CGGSNVQFAV NPVDGEVMII EMNPRVSRSS
0401: ALASKATGFP IAKMAAKLSV GYTLDQIPND ITRKTPASFE PSIDYVVTKI PRFAFEKFPG SQPLLTTQMK SVGESMALGR TFQESFQKAL RSLECGFSGW
0501: GCAKIKELDW DWDQLKYSLR VPNPDRIHAI YAAMKKGMKI DEIYELSMVD KWFLTQLKEL VDVEQYLMSG TLSEITKEDL YEVKKRGFSD KQIAFATKTT
0601: EEEVRTKRIS LGVVPSYKRV DTCAAEFEAH TPYMYSSYDV ECESAPNNKK KVLILGGGPN RIGQGIEFDY CCCHTSFALQ DAGYETIMLN SNPETVSTDY
0701: DTSDRLYFEP LTIEDVLNVI DLEKPDGIIV QFGGQTPLKL ALPIKHYLDK HMPMSLSGAG PVRIWGTSPD SIDAAEDRER FNAILDELKI EQPKGGIAKS
0801: EADALAIAKE VGYPVVVRPS YVLGGRAMEI VYDDSRLITY LENAVQVDPE RPVLVDKYLS DAIEIDVDTL TDSYGNVVIG GIMEHIEQAG VHSGDSACML
0901: PTQTIPASCL QTIRTWTTKL AKKLNVCGLM NCQYAITTSG DVFLLEANPR ASRTVPFVSK AIGHPLAKYA ALVMSGKSLK DLNFEKEVIP KHVSVKEAVF
1001: PFEKFQGCDV ILGPEMRSTG EVMSISSEFS SAFAMAQIAA GQKLPLSGTV FLSLNDMTKP HLEKIAVSFL ELGFKIVATS GTAHFLELKG IPVERVLKLH
1101: EGRPHAADMV ANGQIHLMLI TSSGDALDQK DGRQLRQMAL AYKVPVITTV AGALATAEGI KSLKSSAIKM TALQDFFEVK NVSSLLV
Arabidopsis Description
CARBCarbamoyl-phosphate synthase large chain, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42601]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.