Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26307 | Canola | plastid | 99.49 | 99.49 |
| CDX99865 | Canola | plastid | 97.11 | 99.05 |
| AT1G29900.1 | Thale cress | plastid | 92.52 | 91.66 |
| GSMUA_Achr3P25910_001 | Banana | cytosol | 64.03 | 82.48 |
| VIT_06s0004g03360.t01 | Wine grape | plastid | 81.8 | 80.98 |
| KRH22939 | Soybean | nucleus | 78.15 | 78.82 |
| PGSC0003DMT400019412 | Potato | plastid | 80.36 | 78.82 |
| KRH10406 | Soybean | nucleus | 77.72 | 78.73 |
| Solyc06g075340.2.1 | Tomato | plastid | 79.93 | 78.66 |
| KRG91337 | Soybean | cytosol | 54.17 | 77.78 |
| Zm00001d044250_P001 | Maize | plastid | 76.02 | 76.54 |
| EES00939 | Sorghum | plastid | 75.6 | 75.92 |
| Zm00001d011192_P001 | Maize | plastid | 75.43 | 75.55 |
| HORVU3Hr1G049610.1 | Barley | plastid | 75.26 | 75.51 |
| TraesCS3D01G209100.1 | Wheat | plastid | 74.92 | 75.17 |
| TraesCS3A01G206600.1 | Wheat | plastid | 74.83 | 75.09 |
| TraesCS3B01G238600.1 | Wheat | plastid | 74.83 | 75.09 |
| Os01t0570700-01 | Rice | cytosol, plasma membrane, plastid | 19.98 | 72.09 |
Protein Annotations
Description
AT1G29900 (E=0.0) CARB | CARB (CARBAMOYL PHOSPHATE SYNTHETASE B); ATP binding / carbamoyl-phosphate synthase/ catalytic
Coordinates
chrA09:-:22405580..22409439
Molecular Weight (calculated)
128826.0 Da
IEP (calculated)
5.276
GRAVY (calculated)
-0.109
Length
1176 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSNHCLHLS PNHSSIFTSS KLSNPRLLSR SAINYRAKPR LPSSTFLLPC LNRKASSVVT RVLNSSTPDE KTQPFSPEIV GKRTDLKKIM ILGAGPIVIG
0101: QACEFDYSGT QACKALREEG YEVILINSNP ATIMTDPETA NRTYIAPMTP DLVEQVIAKE RPDALLPTMG GQTALNLAVA LAESGALERY GVELIGAKLD
0201: AIKKAEDREL FKEAMKSIGL KTPPSGIGNT LDECFDIAER IGEFPLIIRP AFTLGGTGGG IAYNREEFES ICKAGLAASV TSQVLVEKSL LGWKEYELEV
0301: MRDLADNVVI ICSIENIDPM GVHTGDSITV APAQTLTDRE YQRLRDYSIA IIREIGVECG GSNVQFAVNP ADGEVMIIEM NPRVSRSSAL ASKATGFPIA
0401: KMAAKLSVGY TLDQIPNDIT RKTPASFEPS IDYVVTKIPR FAFEKFPGSQ PLLTTQMKSV GESMALGRTF QESFQKALRS LETGFSGWGC AKIKELNWDW
0501: DQLKYSLRVP NPDRIHAIYA AMKKGMKVDE IHELSMVDKW FLTQLKELVD VEQYLMSGPP LSEITKEDLY EVKKRGFSDK QIAFATKATE EEVRTKRISL
0601: GVVPSYKRVD TCAAEFEAHT PYMYSSYDFE CESAPNTKKK VLILGGGPNR IGQGIEFDYC CCHTSFALQD AGYETIMLNS NPETVSTDYD TSDRLYFEPL
0701: TIEDVLNVID LEKPDGIIVQ FGGQTPLKLA LPIKNYLDKH KPMSLSGEGP VRIWGTSPDS IDAAEDRERF NAILNELKIE QPKGGIAKSE SDALAIAKEI
0801: GYPVVVRPSY VLGGRAMEIV YDDSKLITYL ENAVEVDPER PVLVDRYLSD AIEIDVDTLT DSYGNVVIGG IMEHIEQAGV HSGDSACMLP TQTIPSSCLE
0901: TIRSWTTKLA KKLNVCGLMN CQYAITSSGD VFLLEANPRA SRTVPFVSKA IGHPLAKYAA LVMSGKSLKD LNFEEEVIPK HISVKEAVFP FEKFQGCDVI
1001: LGPEMRSTGE VMSISSEFPS AFAMAQIAAG QKLPLTGTVF LSLNDMTKPH LEKIAVSFLD LGFKIVATSG TAHFLELKGI PVERVLKLHE GRPHAADMVA
1101: NGQIHLMLIT SSGDALDQKD GRQLRQMALA YKVPVITTVA GALATAEGIK SLKSSAIKMT ALQDFFEVKN ESSLLV
0101: QACEFDYSGT QACKALREEG YEVILINSNP ATIMTDPETA NRTYIAPMTP DLVEQVIAKE RPDALLPTMG GQTALNLAVA LAESGALERY GVELIGAKLD
0201: AIKKAEDREL FKEAMKSIGL KTPPSGIGNT LDECFDIAER IGEFPLIIRP AFTLGGTGGG IAYNREEFES ICKAGLAASV TSQVLVEKSL LGWKEYELEV
0301: MRDLADNVVI ICSIENIDPM GVHTGDSITV APAQTLTDRE YQRLRDYSIA IIREIGVECG GSNVQFAVNP ADGEVMIIEM NPRVSRSSAL ASKATGFPIA
0401: KMAAKLSVGY TLDQIPNDIT RKTPASFEPS IDYVVTKIPR FAFEKFPGSQ PLLTTQMKSV GESMALGRTF QESFQKALRS LETGFSGWGC AKIKELNWDW
0501: DQLKYSLRVP NPDRIHAIYA AMKKGMKVDE IHELSMVDKW FLTQLKELVD VEQYLMSGPP LSEITKEDLY EVKKRGFSDK QIAFATKATE EEVRTKRISL
0601: GVVPSYKRVD TCAAEFEAHT PYMYSSYDFE CESAPNTKKK VLILGGGPNR IGQGIEFDYC CCHTSFALQD AGYETIMLNS NPETVSTDYD TSDRLYFEPL
0701: TIEDVLNVID LEKPDGIIVQ FGGQTPLKLA LPIKNYLDKH KPMSLSGEGP VRIWGTSPDS IDAAEDRERF NAILNELKIE QPKGGIAKSE SDALAIAKEI
0801: GYPVVVRPSY VLGGRAMEIV YDDSKLITYL ENAVEVDPER PVLVDRYLSD AIEIDVDTLT DSYGNVVIGG IMEHIEQAGV HSGDSACMLP TQTIPSSCLE
0901: TIRSWTTKLA KKLNVCGLMN CQYAITSSGD VFLLEANPRA SRTVPFVSKA IGHPLAKYAA LVMSGKSLKD LNFEEEVIPK HISVKEAVFP FEKFQGCDVI
1001: LGPEMRSTGE VMSISSEFPS AFAMAQIAAG QKLPLTGTVF LSLNDMTKPH LEKIAVSFLD LGFKIVATSG TAHFLELKGI PVERVLKLHE GRPHAADMVA
1101: NGQIHLMLIT SSGDALDQKD GRQLRQMALA YKVPVITTVA GALATAEGIK SLKSSAIKMT ALQDFFEVKN ESSLLV
0001: MRNHCLELSS NCSSIFASSK SNPRFSPSKL SYSTFFSRSA IYYRSKPKQA SSSSSFSTFP PCLNRKSSLT HVLKPVSELA DTTTKPFSPE IVGKRTDLKK
0101: IMILGAGPIV IGQACEFDYS GTQACKALRE EGYEVILINS NPATIMTDPE TANRTYIAPM TPELVEQVIE KERPDALLPT MGGQTALNLA VALAESGALE
0201: KYGVELIGAK LGAIKKAEDR ELFKDAMKNI GLKTPPSGIG TTLDECFDIA EKIGEFPLII RPAFTLGGTG GGIAYNKEEF ESICKSGLAA SATSQVLVEK
0301: SLLGWKEYEL EVMRDLADNV VIICSIENID PMGVHTGDSI TVAPAQTLTD REYQRLRDYS IAIIREIGVE CGGSNVQFAV NPVDGEVMII EMNPRVSRSS
0401: ALASKATGFP IAKMAAKLSV GYTLDQIPND ITRKTPASFE PSIDYVVTKI PRFAFEKFPG SQPLLTTQMK SVGESMALGR TFQESFQKAL RSLECGFSGW
0501: GCAKIKELDW DWDQLKYSLR VPNPDRIHAI YAAMKKGMKI DEIYELSMVD KWFLTQLKEL VDVEQYLMSG TLSEITKEDL YEVKKRGFSD KQIAFATKTT
0601: EEEVRTKRIS LGVVPSYKRV DTCAAEFEAH TPYMYSSYDV ECESAPNNKK KVLILGGGPN RIGQGIEFDY CCCHTSFALQ DAGYETIMLN SNPETVSTDY
0701: DTSDRLYFEP LTIEDVLNVI DLEKPDGIIV QFGGQTPLKL ALPIKHYLDK HMPMSLSGAG PVRIWGTSPD SIDAAEDRER FNAILDELKI EQPKGGIAKS
0801: EADALAIAKE VGYPVVVRPS YVLGGRAMEI VYDDSRLITY LENAVQVDPE RPVLVDKYLS DAIEIDVDTL TDSYGNVVIG GIMEHIEQAG VHSGDSACML
0901: PTQTIPASCL QTIRTWTTKL AKKLNVCGLM NCQYAITTSG DVFLLEANPR ASRTVPFVSK AIGHPLAKYA ALVMSGKSLK DLNFEKEVIP KHVSVKEAVF
1001: PFEKFQGCDV ILGPEMRSTG EVMSISSEFS SAFAMAQIAA GQKLPLSGTV FLSLNDMTKP HLEKIAVSFL ELGFKIVATS GTAHFLELKG IPVERVLKLH
1101: EGRPHAADMV ANGQIHLMLI TSSGDALDQK DGRQLRQMAL AYKVPVITTV AGALATAEGI KSLKSSAIKM TALQDFFEVK NVSSLLV
0101: IMILGAGPIV IGQACEFDYS GTQACKALRE EGYEVILINS NPATIMTDPE TANRTYIAPM TPELVEQVIE KERPDALLPT MGGQTALNLA VALAESGALE
0201: KYGVELIGAK LGAIKKAEDR ELFKDAMKNI GLKTPPSGIG TTLDECFDIA EKIGEFPLII RPAFTLGGTG GGIAYNKEEF ESICKSGLAA SATSQVLVEK
0301: SLLGWKEYEL EVMRDLADNV VIICSIENID PMGVHTGDSI TVAPAQTLTD REYQRLRDYS IAIIREIGVE CGGSNVQFAV NPVDGEVMII EMNPRVSRSS
0401: ALASKATGFP IAKMAAKLSV GYTLDQIPND ITRKTPASFE PSIDYVVTKI PRFAFEKFPG SQPLLTTQMK SVGESMALGR TFQESFQKAL RSLECGFSGW
0501: GCAKIKELDW DWDQLKYSLR VPNPDRIHAI YAAMKKGMKI DEIYELSMVD KWFLTQLKEL VDVEQYLMSG TLSEITKEDL YEVKKRGFSD KQIAFATKTT
0601: EEEVRTKRIS LGVVPSYKRV DTCAAEFEAH TPYMYSSYDV ECESAPNNKK KVLILGGGPN RIGQGIEFDY CCCHTSFALQ DAGYETIMLN SNPETVSTDY
0701: DTSDRLYFEP LTIEDVLNVI DLEKPDGIIV QFGGQTPLKL ALPIKHYLDK HMPMSLSGAG PVRIWGTSPD SIDAAEDRER FNAILDELKI EQPKGGIAKS
0801: EADALAIAKE VGYPVVVRPS YVLGGRAMEI VYDDSRLITY LENAVQVDPE RPVLVDKYLS DAIEIDVDTL TDSYGNVVIG GIMEHIEQAG VHSGDSACML
0901: PTQTIPASCL QTIRTWTTKL AKKLNVCGLM NCQYAITTSG DVFLLEANPR ASRTVPFVSK AIGHPLAKYA ALVMSGKSLK DLNFEKEVIP KHVSVKEAVF
1001: PFEKFQGCDV ILGPEMRSTG EVMSISSEFS SAFAMAQIAA GQKLPLSGTV FLSLNDMTKP HLEKIAVSFL ELGFKIVATS GTAHFLELKG IPVERVLKLH
1101: EGRPHAADMV ANGQIHLMLI TSSGDALDQK DGRQLRQMAL AYKVPVITTV AGALATAEGI KSLKSSAIKM TALQDFFEVK NVSSLLV
Arabidopsis Description
CARBCarbamoyl-phosphate synthase large chain, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42601]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.