Factsheet for HORVU3Hr1G049610.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G209100.1	Wheat	plastid	98.55	98.55
TraesCS3A01G206600.1	Wheat	plastid	98.38	98.38
TraesCS3B01G238600.1	Wheat	plastid	98.21	98.21
Os01t0570700-01	Rice	cytosol, plasma membrane, plastid	25.77	92.64
EES00939	Sorghum	plastid	90.02	90.09
Zm00001d044250_P001	Maize	plastid	89.33	89.64
Zm00001d011192_P001	Maize	plastid	89.59	89.44
GSMUA_Achr3P25910_001	Banana	cytosol	66.64	85.54
VIT_06s0004g03360.t01	Wine grape	plastid	77.65	76.6
CDX99865	Canola	plastid	75.17	76.41
Solyc06g075340.2.1	Tomato	plastid	77.47	75.98
KRH10406	Soybean	nucleus	74.74	75.45
PGSC0003DMT400019412	Potato	plastid	77.13	75.4
CDY26307	Canola	plastid	75.6	75.34
Bra032344.1-P	Field mustard	plastid	75.51	75.26
KRH22939	Soybean	nucleus	74.83	75.21
KRG91337	Soybean	cytosol	52.3	74.85
AT1G29900.1	Thale cress	plastid	75.51	74.56

Protein Annotations

KEGG:00240+6.3.5.5	KEGG:00250+6.3.5.5	Gene3D:1.10.1030.10	Gene3D:3.30.470.20	Gene3D:3.40.50.1380	Gene3D:3.40.50.20
MapMan:4.1.1.1.2.1.1	MapMan:6.2.1.1.1	InterPro:ATP-grasp	InterPro:CarbamoylP_synth_lsu	InterPro:CarbamoylP_synth_lsu_oligo	InterPro:CarbamoylP_synth_lsu_oligo_sf
InterPro:CbamoylP_synth_lsu-like_ATP-bd	InterPro:CbamoylP_synth_lsu_CPSase_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004070
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006207	GO:GO:0006520	GO:GO:0006541
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016597
GO:GO:0016740	GO:GO:0016743	GO:GO:0046872	EnsemblPlantsGene:HORVU3Hr1G049610	EnsemblPlants:HORVU3Hr1G049610.1	InterPro:IPR011761
InterPro:IPR036897	InterPro:IPR036914	UniProt:M0X5Q3	HAMAP:MF_01210_A	HAMAP:MF_01210_B	InterPro:MGS-like_dom
InterPro:MGS-like_dom_sf	InterPro:MGS_CPS_CarB	PFAM:PF02142	PFAM:PF02786	PFAM:PF02787	PRINTS:PR00098
ScanProsite:PS00866	ScanProsite:PS00867	PFscan:PS50975	PANTHER:PTHR11405	PANTHER:PTHR11405:SF47	InterPro:PreATP-grasp_dom_sf
SMART:SM00851	SMART:SM01096	SUPFAM:SSF48108	SUPFAM:SSF52335	SUPFAM:SSF52440	SUPFAM:SSF56059
TIGRFAMs:TIGR01369	UniParc:UPI000295B1A7	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:350097931..350103029

Molecular Weight (calculated)

127686.0 Da

IEP (calculated)

5.817

GRAVY (calculated)

-0.103

Length

1172 amino acids

Sequence
(BLAST)

0001: MATSLSSHSH LRTCPSYAHR ATVLLRSLLP FPRRHHGSSR RGLSARSASS NGAAQDTAVT VRHFAAEPTK GGKLAGVKKI MILGAGPIVI GQACEFDYSG
0101: TQACKALVEE GYEVVLVNSN PATIMTDPDL AHRTYIGPMT PPLVEGIIAN ERPDALLPTM GGQTALNLAV SLAESGALDR LGVRLIGASL PAIRAAEDRQ
0201: LFKQAMDRIG LKTPPSGIGT TLEECLTIAK DIGEFPLIVR PAFTLGGTGG GIAYNRAEFE DICRSGLAAS HTQQVLVEKS LLGWKEYELE VMRDMADNVV
0301: IICSIENIDP MGVHTGDSIT VAPAQTLTDK EYQRLRDYSV AIIREIGVEC GGSNVQFAVN PADGEVMVIE MNPRVSRSSA LASKATGFPI AKMAAKLSVG
0401: YTLDQIPNDI TKKTPASFEP SIDYVVTKIP RFAFEKFPGS EPILTTQMKS VGESMALGRT FQESFQKAVR SLETGFAGWG CAPIKELDWD WEKIKYSLRV
0501: PNPDRIHAVY AAFKKGMRVE EIHEISFIDK WFLTELKELV DVEQFLISKK LDELSKDDFY QVKRRGFSDN QIAFATSSSE SDVRARRSAL GVIPTYKRVD
0601: TCAAEFEANT PYMYSSYEYE CESAPTNRKK VLILGGGPNR IGQGIEFDYC CCHASFALRE AGYETIMMNS NPETVSTDYD TSDRLYFEPL TAEDVTNVID
0701: LERPDGIIVQ YGGQTPLKLA LPIQRHLEEK KLRSASGTGF VKIWGTSPDS IDAAEDRKRF NAILEELGIE QPKGGIARSE SDALSIASEV GYPVVVRPSY
0801: VLGGRAMEIV YNDEKLIKYL ATAVQVDPER PVLVDKYLND AIEIDIDALA DSVGNVVIGG IMEHIEQAGI HSGDSACSLP TRTVSTKCLD IIRSWTTKLA
0901: KRLNVCGLMN CQYAITPTGE VFLLEANPRA SRTVPFVSKA IGHPLAKYAS LIMSGVTLPE LGFTKEVIPK HVSVKEAVLP FEKFQGCDIL LGPEMRSTGE
1001: VMGIDYEFSG AFAKAQIAAG QILPVSGTVF LSLNDLTKRH LAEIGRGFRE VGFNIIATSG TAKVLELEGI PVEPVLKIHE GRPNARDMLK NGQIQVMVIT
1101: SSGDDLDSRD GLQLRRLALA YKVPIITTVD GARATMDAIK SMKNKSIEIL ALQDYFQPAD APQKLPAAQA AP

Best Arabidopsis Sequence Match ( AT1G29900.1 )
(BLAST)

0001: MRNHCLELSS NCSSIFASSK SNPRFSPSKL SYSTFFSRSA IYYRSKPKQA SSSSSFSTFP PCLNRKSSLT HVLKPVSELA DTTTKPFSPE IVGKRTDLKK
0101: IMILGAGPIV IGQACEFDYS GTQACKALRE EGYEVILINS NPATIMTDPE TANRTYIAPM TPELVEQVIE KERPDALLPT MGGQTALNLA VALAESGALE
0201: KYGVELIGAK LGAIKKAEDR ELFKDAMKNI GLKTPPSGIG TTLDECFDIA EKIGEFPLII RPAFTLGGTG GGIAYNKEEF ESICKSGLAA SATSQVLVEK
0301: SLLGWKEYEL EVMRDLADNV VIICSIENID PMGVHTGDSI TVAPAQTLTD REYQRLRDYS IAIIREIGVE CGGSNVQFAV NPVDGEVMII EMNPRVSRSS
0401: ALASKATGFP IAKMAAKLSV GYTLDQIPND ITRKTPASFE PSIDYVVTKI PRFAFEKFPG SQPLLTTQMK SVGESMALGR TFQESFQKAL RSLECGFSGW
0501: GCAKIKELDW DWDQLKYSLR VPNPDRIHAI YAAMKKGMKI DEIYELSMVD KWFLTQLKEL VDVEQYLMSG TLSEITKEDL YEVKKRGFSD KQIAFATKTT
0601: EEEVRTKRIS LGVVPSYKRV DTCAAEFEAH TPYMYSSYDV ECESAPNNKK KVLILGGGPN RIGQGIEFDY CCCHTSFALQ DAGYETIMLN SNPETVSTDY
0701: DTSDRLYFEP LTIEDVLNVI DLEKPDGIIV QFGGQTPLKL ALPIKHYLDK HMPMSLSGAG PVRIWGTSPD SIDAAEDRER FNAILDELKI EQPKGGIAKS
0801: EADALAIAKE VGYPVVVRPS YVLGGRAMEI VYDDSRLITY LENAVQVDPE RPVLVDKYLS DAIEIDVDTL TDSYGNVVIG GIMEHIEQAG VHSGDSACML
0901: PTQTIPASCL QTIRTWTTKL AKKLNVCGLM NCQYAITTSG DVFLLEANPR ASRTVPFVSK AIGHPLAKYA ALVMSGKSLK DLNFEKEVIP KHVSVKEAVF
1001: PFEKFQGCDV ILGPEMRSTG EVMSISSEFS SAFAMAQIAA GQKLPLSGTV FLSLNDMTKP HLEKIAVSFL ELGFKIVATS GTAHFLELKG IPVERVLKLH
1101: EGRPHAADMV ANGQIHLMLI TSSGDALDQK DGRQLRQMAL AYKVPVITTV AGALATAEGI KSLKSSAIKM TALQDFFEVK NVSSLLV

Arabidopsis Description

CARBCarbamoyl-phosphate synthase large chain, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42601]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.