Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0570700-01 | Rice | cytosol, plasma membrane, plastid | 25.19 | 70.55 |
| Zm00001d044250_P001 | Maize | plastid | 86.09 | 67.29 |
| EES00939 | Sorghum | plastid | 86.09 | 67.12 |
| TraesCS3B01G238600.1 | Wheat | plastid | 85.65 | 66.72 |
| TraesCS3D01G209100.1 | Wheat | plastid | 85.65 | 66.72 |
| HORVU3Hr1G049610.1 | Barley | plastid | 85.54 | 66.64 |
| TraesCS3A01G206600.1 | Wheat | plastid | 85.54 | 66.64 |
| Zm00001d011192_P001 | Maize | plastid | 85.32 | 66.35 |
| VIT_06s0004g03360.t01 | Wine grape | plastid | 85.54 | 65.74 |
| CDX99865 | Canola | plastid | 82.58 | 65.39 |
| KRG91337 | Soybean | cytosol | 57.83 | 64.47 |
| CDY26307 | Canola | plastid | 82.58 | 64.12 |
| Bra032344.1-P | Field mustard | plastid | 82.48 | 64.03 |
| Solyc06g075340.2.1 | Tomato | plastid | 83.35 | 63.68 |
| KRH10406 | Soybean | nucleus | 80.94 | 63.65 |
| PGSC0003DMT400019412 | Potato | plastid | 83.24 | 63.39 |
| KRH22939 | Soybean | nucleus | 80.94 | 63.38 |
| AT1G29900.1 | Thale cress | plastid | 82.04 | 63.1 |
Protein Annotations
| KEGG:00240+6.3.5.5 | KEGG:00250+6.3.5.5 | Gene3D:3.30.1490.20 | Gene3D:3.30.470.20 | Gene3D:3.40.50.1380 | Gene3D:3.40.50.20 |
| MapMan:4.1.1.1.2.1.1 | MapMan:6.2.1.1.1 | InterPro:ATP-grasp | InterPro:ATP_grasp_subdomain_1 | InterPro:CarbamoylP_synth_lsu_oligo | InterPro:CarbamoylP_synth_lsu_oligo_sf |
| InterPro:CbamoylP_synth_lsu-like_ATP-bd | InterPro:CbamoylP_synth_lsu_CPSase_dom | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0046872 |
| EnsemblPlantsGene:GSMUA_Achr3G25910_001 | EnsemblPlants:GSMUA_Achr3P25910_001 | EnsemblPlants:GSMUA_Achr3T25910_001 | InterPro:IPR011761 | InterPro:IPR013815 | InterPro:IPR036897 |
| InterPro:IPR036914 | UniProt:M0SHV7 | InterPro:MGS-like_dom | InterPro:MGS-like_dom_sf | PFAM:PF02142 | PFAM:PF02786 |
| PFAM:PF02787 | PRINTS:PR00098 | ScanProsite:PS00866 | ScanProsite:PS00867 | PFscan:PS50975 | PANTHER:PTHR11405 |
| PANTHER:PTHR11405:SF47 | InterPro:PreATP-grasp_dom_sf | SMART:SM01096 | SUPFAM:SSF48108 | SUPFAM:SSF52335 | SUPFAM:SSF52440 |
| SUPFAM:SSF56059 | UniParc:UPI000295595D | : | : | : | : |
Description
Carbamoyl-phosphate synthase large chain [Source:GMGC_GENE;Acc:GSMUA_Achr3G25910_001]
Coordinates
chr3:-:25938402..25943465
Molecular Weight (calculated)
98954.7 Da
IEP (calculated)
5.281
GRAVY (calculated)
0.010
Length
913 amino acids
Sequence
(BLAST)
(BLAST)
001: MILGAGPIVI GQACEFDYSG TQACKALVDE GYEVVLVNSN PATIMTDPDL AHRTYVGPMT PELVEQIIDA ERPDALLPTM GGQTALNLAV ALADSGALAR
101: HGIELIGAKL KAIKTAEDRD LFKRAMDRIG LRTPPSGIGN TLEECLAIAD DIGGFPLIIR PAFTLGGTGG GIAYNRDEFE AICRAGLAAS LTTQVLVEKS
201: LLGWKEYELE RLRDYSVAII REIGVECGGS NVQFAVNPVD GEVMVIEMNP RVSRSSALAS KATGFPIAKM AAKLSVGYTL DQIPNDITKK TPASFEPSID
301: YVVTKIPRFA FEKFPGSEPI LTTQMKSVGE AMALGRTFQE SFQKAVRSLE SGMRVPNPDR MHAIYAAIKK GMKVEEIHEL SFIDKWFLTQ LKELVDSDVR
401: SRRLSLAPTP KKKVLILGGG PNRIGQGIEF DYCCCHASFA LKENGYETIM MNSNPETVST DYDTSDRLYF EPLTVEDVLN VIDLERPNGI IVQFGGQTPL
501: KLALPIQQYL EEQKLVASTG TGHVQIWGTS PDSIDAAEDR ERFNAILDNL KIEQPKGGIA KSESDAISIA SKIGYPVVVR PSYVLGGRAM EIVYNDDKLS
601: KYLENAVEVD PERPVLIDKY LTDAIEIDVD ALADSNGNVV IGGIMEHIEQ AGVHSGDSAC LLPTKTVSNK CLDTIRQWTI KLAKKLDVCG LMNCQYAITA
701: SGDVYLLEAN PRASRTVPFV SKAIGHPLAK YASLVMSGKN LHELGFTKEV VPRHVSVKEA VLPFEKFQGC DVLLGPEMRS TGEVMGIDFD FHVAFAKAQI
801: AAGQQLPASG TVFLSLNDLT KPHLASIARG FLELGFKIVA TSGTARVLDL EGIPLRRMAL AYKIPIITTV AGALATVEAI KSLKHSSIKM LALQDYFTVS
901: DEHPKLQAAS SAI
101: HGIELIGAKL KAIKTAEDRD LFKRAMDRIG LRTPPSGIGN TLEECLAIAD DIGGFPLIIR PAFTLGGTGG GIAYNRDEFE AICRAGLAAS LTTQVLVEKS
201: LLGWKEYELE RLRDYSVAII REIGVECGGS NVQFAVNPVD GEVMVIEMNP RVSRSSALAS KATGFPIAKM AAKLSVGYTL DQIPNDITKK TPASFEPSID
301: YVVTKIPRFA FEKFPGSEPI LTTQMKSVGE AMALGRTFQE SFQKAVRSLE SGMRVPNPDR MHAIYAAIKK GMKVEEIHEL SFIDKWFLTQ LKELVDSDVR
401: SRRLSLAPTP KKKVLILGGG PNRIGQGIEF DYCCCHASFA LKENGYETIM MNSNPETVST DYDTSDRLYF EPLTVEDVLN VIDLERPNGI IVQFGGQTPL
501: KLALPIQQYL EEQKLVASTG TGHVQIWGTS PDSIDAAEDR ERFNAILDNL KIEQPKGGIA KSESDAISIA SKIGYPVVVR PSYVLGGRAM EIVYNDDKLS
601: KYLENAVEVD PERPVLIDKY LTDAIEIDVD ALADSNGNVV IGGIMEHIEQ AGVHSGDSAC LLPTKTVSNK CLDTIRQWTI KLAKKLDVCG LMNCQYAITA
701: SGDVYLLEAN PRASRTVPFV SKAIGHPLAK YASLVMSGKN LHELGFTKEV VPRHVSVKEA VLPFEKFQGC DVLLGPEMRS TGEVMGIDFD FHVAFAKAQI
801: AAGQQLPASG TVFLSLNDLT KPHLASIARG FLELGFKIVA TSGTARVLDL EGIPLRRMAL AYKIPIITTV AGALATVEAI KSLKHSSIKM LALQDYFTVS
901: DEHPKLQAAS SAI
0001: MRNHCLELSS NCSSIFASSK SNPRFSPSKL SYSTFFSRSA IYYRSKPKQA SSSSSFSTFP PCLNRKSSLT HVLKPVSELA DTTTKPFSPE IVGKRTDLKK
0101: IMILGAGPIV IGQACEFDYS GTQACKALRE EGYEVILINS NPATIMTDPE TANRTYIAPM TPELVEQVIE KERPDALLPT MGGQTALNLA VALAESGALE
0201: KYGVELIGAK LGAIKKAEDR ELFKDAMKNI GLKTPPSGIG TTLDECFDIA EKIGEFPLII RPAFTLGGTG GGIAYNKEEF ESICKSGLAA SATSQVLVEK
0301: SLLGWKEYEL EVMRDLADNV VIICSIENID PMGVHTGDSI TVAPAQTLTD REYQRLRDYS IAIIREIGVE CGGSNVQFAV NPVDGEVMII EMNPRVSRSS
0401: ALASKATGFP IAKMAAKLSV GYTLDQIPND ITRKTPASFE PSIDYVVTKI PRFAFEKFPG SQPLLTTQMK SVGESMALGR TFQESFQKAL RSLECGFSGW
0501: GCAKIKELDW DWDQLKYSLR VPNPDRIHAI YAAMKKGMKI DEIYELSMVD KWFLTQLKEL VDVEQYLMSG TLSEITKEDL YEVKKRGFSD KQIAFATKTT
0601: EEEVRTKRIS LGVVPSYKRV DTCAAEFEAH TPYMYSSYDV ECESAPNNKK KVLILGGGPN RIGQGIEFDY CCCHTSFALQ DAGYETIMLN SNPETVSTDY
0701: DTSDRLYFEP LTIEDVLNVI DLEKPDGIIV QFGGQTPLKL ALPIKHYLDK HMPMSLSGAG PVRIWGTSPD SIDAAEDRER FNAILDELKI EQPKGGIAKS
0801: EADALAIAKE VGYPVVVRPS YVLGGRAMEI VYDDSRLITY LENAVQVDPE RPVLVDKYLS DAIEIDVDTL TDSYGNVVIG GIMEHIEQAG VHSGDSACML
0901: PTQTIPASCL QTIRTWTTKL AKKLNVCGLM NCQYAITTSG DVFLLEANPR ASRTVPFVSK AIGHPLAKYA ALVMSGKSLK DLNFEKEVIP KHVSVKEAVF
1001: PFEKFQGCDV ILGPEMRSTG EVMSISSEFS SAFAMAQIAA GQKLPLSGTV FLSLNDMTKP HLEKIAVSFL ELGFKIVATS GTAHFLELKG IPVERVLKLH
1101: EGRPHAADMV ANGQIHLMLI TSSGDALDQK DGRQLRQMAL AYKVPVITTV AGALATAEGI KSLKSSAIKM TALQDFFEVK NVSSLLV
0101: IMILGAGPIV IGQACEFDYS GTQACKALRE EGYEVILINS NPATIMTDPE TANRTYIAPM TPELVEQVIE KERPDALLPT MGGQTALNLA VALAESGALE
0201: KYGVELIGAK LGAIKKAEDR ELFKDAMKNI GLKTPPSGIG TTLDECFDIA EKIGEFPLII RPAFTLGGTG GGIAYNKEEF ESICKSGLAA SATSQVLVEK
0301: SLLGWKEYEL EVMRDLADNV VIICSIENID PMGVHTGDSI TVAPAQTLTD REYQRLRDYS IAIIREIGVE CGGSNVQFAV NPVDGEVMII EMNPRVSRSS
0401: ALASKATGFP IAKMAAKLSV GYTLDQIPND ITRKTPASFE PSIDYVVTKI PRFAFEKFPG SQPLLTTQMK SVGESMALGR TFQESFQKAL RSLECGFSGW
0501: GCAKIKELDW DWDQLKYSLR VPNPDRIHAI YAAMKKGMKI DEIYELSMVD KWFLTQLKEL VDVEQYLMSG TLSEITKEDL YEVKKRGFSD KQIAFATKTT
0601: EEEVRTKRIS LGVVPSYKRV DTCAAEFEAH TPYMYSSYDV ECESAPNNKK KVLILGGGPN RIGQGIEFDY CCCHTSFALQ DAGYETIMLN SNPETVSTDY
0701: DTSDRLYFEP LTIEDVLNVI DLEKPDGIIV QFGGQTPLKL ALPIKHYLDK HMPMSLSGAG PVRIWGTSPD SIDAAEDRER FNAILDELKI EQPKGGIAKS
0801: EADALAIAKE VGYPVVVRPS YVLGGRAMEI VYDDSRLITY LENAVQVDPE RPVLVDKYLS DAIEIDVDTL TDSYGNVVIG GIMEHIEQAG VHSGDSACML
0901: PTQTIPASCL QTIRTWTTKL AKKLNVCGLM NCQYAITTSG DVFLLEANPR ASRTVPFVSK AIGHPLAKYA ALVMSGKSLK DLNFEKEVIP KHVSVKEAVF
1001: PFEKFQGCDV ILGPEMRSTG EVMSISSEFS SAFAMAQIAA GQKLPLSGTV FLSLNDMTKP HLEKIAVSFL ELGFKIVATS GTAHFLELKG IPVERVLKLH
1101: EGRPHAADMV ANGQIHLMLI TSSGDALDQK DGRQLRQMAL AYKVPVITTV AGALATAEGI KSLKSSAIKM TALQDFFEVK NVSSLLV
Arabidopsis Description
CARBCarbamoyl-phosphate synthase large chain, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42601]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.