Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G206600.1 | Wheat | plastid | 99.83 | 99.83 |
| TraesCS3B01G238600.1 | Wheat | plastid | 99.49 | 99.49 |
| HORVU3Hr1G049610.1 | Barley | plastid | 98.55 | 98.55 |
| Os01t0570700-01 | Rice | cytosol, plasma membrane, plastid | 25.77 | 92.64 |
| EES00939 | Sorghum | plastid | 90.36 | 90.44 |
| Zm00001d044250_P001 | Maize | plastid | 89.68 | 89.98 |
| Zm00001d011192_P001 | Maize | plastid | 90.02 | 89.86 |
| GSMUA_Achr3P25910_001 | Banana | cytosol | 66.72 | 85.65 |
| VIT_06s0004g03360.t01 | Wine grape | plastid | 77.73 | 76.68 |
| CDX99865 | Canola | plastid | 74.83 | 76.06 |
| Solyc06g075340.2.1 | Tomato | plastid | 77.39 | 75.9 |
| KRH10406 | Soybean | nucleus | 74.74 | 75.45 |
| PGSC0003DMT400019412 | Potato | plastid | 77.05 | 75.31 |
| KRH22939 | Soybean | nucleus | 74.83 | 75.21 |
| CDY26307 | Canola | plastid | 75.26 | 75.0 |
| Bra032344.1-P | Field mustard | plastid | 75.17 | 74.92 |
| KRG91337 | Soybean | cytosol | 52.3 | 74.85 |
| AT1G29900.1 | Thale cress | plastid | 75.17 | 74.22 |
Protein Annotations
| KEGG:00240+6.3.5.5 | KEGG:00250+6.3.5.5 | Gene3D:1.10.1030.10 | Gene3D:3.30.470.20 | Gene3D:3.40.50.1380 | Gene3D:3.40.50.20 |
| MapMan:4.1.1.1.2.1.1 | MapMan:6.2.1.1.1 | InterPro:ATP-grasp | InterPro:CarbamoylP_synth_lsu | InterPro:CarbamoylP_synth_lsu_oligo | InterPro:CarbamoylP_synth_lsu_oligo_sf |
| InterPro:CbamoylP_synth_lsu-like_ATP-bd | InterPro:CbamoylP_synth_lsu_CPSase_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0046872 | InterPro:IPR011761 | InterPro:IPR036897 |
| InterPro:IPR036914 | HAMAP:MF_01210_A | HAMAP:MF_01210_B | InterPro:MGS-like_dom | InterPro:MGS-like_dom_sf | InterPro:MGS_CPS_CarB |
| PFAM:PF02142 | PFAM:PF02786 | PFAM:PF02787 | PRINTS:PR00098 | ScanProsite:PS00866 | ScanProsite:PS00867 |
| PFscan:PS50975 | PANTHER:PTHR11405 | PANTHER:PTHR11405:SF47 | InterPro:PreATP-grasp_dom_sf | SMART:SM00851 | SMART:SM01096 |
| SUPFAM:SSF48108 | SUPFAM:SSF52335 | SUPFAM:SSF52440 | SUPFAM:SSF56059 | TIGRFAMs:TIGR01369 | EnsemblPlantsGene:TraesCS3D01G209100 |
| EnsemblPlants:TraesCS3D01G209100.1 | TIGR:cd01424 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:276537338..276542188
Molecular Weight (calculated)
127582.0 Da
IEP (calculated)
6.052
GRAVY (calculated)
-0.110
Length
1172 amino acids
Sequence
(BLAST)
(BLAST)
0001: MATSLSSHSQ LRACPSHAHR ATVLSRSLLP FPRRHHGSSR RGLSARSASS NGAAQDTAVT VRHFAAEPTK GGKLAGVKKI MILGAGPIVI GQACEFDYSG
0101: TQACKALVEE GYEVVLVNSN PATIMTDPDL AHRTYIGPMT PPLVEGIIAN ERPDALLPTM GGQTALNLAV SLAESGALDR LGVRLIGASL PAIRAAEDRQ
0201: LFKQAMDRIG LKTPPSGIGT TLEECLAIAK DIGEFPLIVR PAFTLGGTGG GIAYNRAEFE DICRSGLAAS HTQQVLVEKS LLGWKEYELE VMRDMADNVV
0301: IICSIENIDP MGVHTGDSIT VAPAQTLTDK EYQRLRDHSV AIIREIGVEC GGSNVQFAVN PADGEVMVIE MNPRVSRSSA LASKATGFPI AKMAAKLSVG
0401: YTLDQIPNDI TKKTPASFEP SIDYVVTKIP RFAFEKFPGS EPILTTQMKS VGESMALGRT FQESFQKAVR SLETGFAGWG CAPIKELDWD WEKIKYSLRV
0501: PNPDRIHAVY AAFKKGMRVE DIHEISFIDK WFLTELKELV DVEQFLISKN LDQLSKDDFY QVKRRGFSDK QIAFATSSSE SDVRARRSAL GVTPTYKRVD
0601: TCAAEFEANT PYMYSSYEYE CESAPTNRKK VLILGGGPNR IGQGIEFDYC CCHASFALRE AGYETIMMNS NPETVSTDYD TSDRLYFEPL TVEDVTNVID
0701: LERPDGIIVQ YGGQTPLKLA LPIQRHLEEK KLRSASGTGF VKIWGTSPDS IDAAEDRKRF NAILEELGIE QPKGGIARSE SDALSIASEV GYPVVVRPSY
0801: VLGGRAMEIV YNDEKLIKYL ATAVQVDPER PVLVDKYLND AIEIDIDALA DSVGNVVIGG IMEHIEQAGI HSGDSACSLP TRTVSTKCLD IIRSWTTKLA
0901: KRLNVCGLMN CQYAITPTGE VYLLEANPRA SRTVPFVSKA IGHPLAKYAS LIMSGVTLPE LGFTKEVIPK HVSVKEAVLP FEKFQGCDIL LGPEMRSTGE
1001: VMGIDYEFSG AFAKAQIAAG QILPVSGTVF VSLNDLTKRH LAEIGRGFRE LGFNIIATSG TAKVLQLEGI PVEPVLKIHE GRPNARDMLK NGQIQVMVIT
1101: SSGDDLDSRD GLQLRRLALA YKVPIITTVD GARATMDAIK SMKNKSIEIL ALQDYFQPAD APQKLPAAQV AP
0101: TQACKALVEE GYEVVLVNSN PATIMTDPDL AHRTYIGPMT PPLVEGIIAN ERPDALLPTM GGQTALNLAV SLAESGALDR LGVRLIGASL PAIRAAEDRQ
0201: LFKQAMDRIG LKTPPSGIGT TLEECLAIAK DIGEFPLIVR PAFTLGGTGG GIAYNRAEFE DICRSGLAAS HTQQVLVEKS LLGWKEYELE VMRDMADNVV
0301: IICSIENIDP MGVHTGDSIT VAPAQTLTDK EYQRLRDHSV AIIREIGVEC GGSNVQFAVN PADGEVMVIE MNPRVSRSSA LASKATGFPI AKMAAKLSVG
0401: YTLDQIPNDI TKKTPASFEP SIDYVVTKIP RFAFEKFPGS EPILTTQMKS VGESMALGRT FQESFQKAVR SLETGFAGWG CAPIKELDWD WEKIKYSLRV
0501: PNPDRIHAVY AAFKKGMRVE DIHEISFIDK WFLTELKELV DVEQFLISKN LDQLSKDDFY QVKRRGFSDK QIAFATSSSE SDVRARRSAL GVTPTYKRVD
0601: TCAAEFEANT PYMYSSYEYE CESAPTNRKK VLILGGGPNR IGQGIEFDYC CCHASFALRE AGYETIMMNS NPETVSTDYD TSDRLYFEPL TVEDVTNVID
0701: LERPDGIIVQ YGGQTPLKLA LPIQRHLEEK KLRSASGTGF VKIWGTSPDS IDAAEDRKRF NAILEELGIE QPKGGIARSE SDALSIASEV GYPVVVRPSY
0801: VLGGRAMEIV YNDEKLIKYL ATAVQVDPER PVLVDKYLND AIEIDIDALA DSVGNVVIGG IMEHIEQAGI HSGDSACSLP TRTVSTKCLD IIRSWTTKLA
0901: KRLNVCGLMN CQYAITPTGE VYLLEANPRA SRTVPFVSKA IGHPLAKYAS LIMSGVTLPE LGFTKEVIPK HVSVKEAVLP FEKFQGCDIL LGPEMRSTGE
1001: VMGIDYEFSG AFAKAQIAAG QILPVSGTVF VSLNDLTKRH LAEIGRGFRE LGFNIIATSG TAKVLQLEGI PVEPVLKIHE GRPNARDMLK NGQIQVMVIT
1101: SSGDDLDSRD GLQLRRLALA YKVPIITTVD GARATMDAIK SMKNKSIEIL ALQDYFQPAD APQKLPAAQV AP
0001: MRNHCLELSS NCSSIFASSK SNPRFSPSKL SYSTFFSRSA IYYRSKPKQA SSSSSFSTFP PCLNRKSSLT HVLKPVSELA DTTTKPFSPE IVGKRTDLKK
0101: IMILGAGPIV IGQACEFDYS GTQACKALRE EGYEVILINS NPATIMTDPE TANRTYIAPM TPELVEQVIE KERPDALLPT MGGQTALNLA VALAESGALE
0201: KYGVELIGAK LGAIKKAEDR ELFKDAMKNI GLKTPPSGIG TTLDECFDIA EKIGEFPLII RPAFTLGGTG GGIAYNKEEF ESICKSGLAA SATSQVLVEK
0301: SLLGWKEYEL EVMRDLADNV VIICSIENID PMGVHTGDSI TVAPAQTLTD REYQRLRDYS IAIIREIGVE CGGSNVQFAV NPVDGEVMII EMNPRVSRSS
0401: ALASKATGFP IAKMAAKLSV GYTLDQIPND ITRKTPASFE PSIDYVVTKI PRFAFEKFPG SQPLLTTQMK SVGESMALGR TFQESFQKAL RSLECGFSGW
0501: GCAKIKELDW DWDQLKYSLR VPNPDRIHAI YAAMKKGMKI DEIYELSMVD KWFLTQLKEL VDVEQYLMSG TLSEITKEDL YEVKKRGFSD KQIAFATKTT
0601: EEEVRTKRIS LGVVPSYKRV DTCAAEFEAH TPYMYSSYDV ECESAPNNKK KVLILGGGPN RIGQGIEFDY CCCHTSFALQ DAGYETIMLN SNPETVSTDY
0701: DTSDRLYFEP LTIEDVLNVI DLEKPDGIIV QFGGQTPLKL ALPIKHYLDK HMPMSLSGAG PVRIWGTSPD SIDAAEDRER FNAILDELKI EQPKGGIAKS
0801: EADALAIAKE VGYPVVVRPS YVLGGRAMEI VYDDSRLITY LENAVQVDPE RPVLVDKYLS DAIEIDVDTL TDSYGNVVIG GIMEHIEQAG VHSGDSACML
0901: PTQTIPASCL QTIRTWTTKL AKKLNVCGLM NCQYAITTSG DVFLLEANPR ASRTVPFVSK AIGHPLAKYA ALVMSGKSLK DLNFEKEVIP KHVSVKEAVF
1001: PFEKFQGCDV ILGPEMRSTG EVMSISSEFS SAFAMAQIAA GQKLPLSGTV FLSLNDMTKP HLEKIAVSFL ELGFKIVATS GTAHFLELKG IPVERVLKLH
1101: EGRPHAADMV ANGQIHLMLI TSSGDALDQK DGRQLRQMAL AYKVPVITTV AGALATAEGI KSLKSSAIKM TALQDFFEVK NVSSLLV
0101: IMILGAGPIV IGQACEFDYS GTQACKALRE EGYEVILINS NPATIMTDPE TANRTYIAPM TPELVEQVIE KERPDALLPT MGGQTALNLA VALAESGALE
0201: KYGVELIGAK LGAIKKAEDR ELFKDAMKNI GLKTPPSGIG TTLDECFDIA EKIGEFPLII RPAFTLGGTG GGIAYNKEEF ESICKSGLAA SATSQVLVEK
0301: SLLGWKEYEL EVMRDLADNV VIICSIENID PMGVHTGDSI TVAPAQTLTD REYQRLRDYS IAIIREIGVE CGGSNVQFAV NPVDGEVMII EMNPRVSRSS
0401: ALASKATGFP IAKMAAKLSV GYTLDQIPND ITRKTPASFE PSIDYVVTKI PRFAFEKFPG SQPLLTTQMK SVGESMALGR TFQESFQKAL RSLECGFSGW
0501: GCAKIKELDW DWDQLKYSLR VPNPDRIHAI YAAMKKGMKI DEIYELSMVD KWFLTQLKEL VDVEQYLMSG TLSEITKEDL YEVKKRGFSD KQIAFATKTT
0601: EEEVRTKRIS LGVVPSYKRV DTCAAEFEAH TPYMYSSYDV ECESAPNNKK KVLILGGGPN RIGQGIEFDY CCCHTSFALQ DAGYETIMLN SNPETVSTDY
0701: DTSDRLYFEP LTIEDVLNVI DLEKPDGIIV QFGGQTPLKL ALPIKHYLDK HMPMSLSGAG PVRIWGTSPD SIDAAEDRER FNAILDELKI EQPKGGIAKS
0801: EADALAIAKE VGYPVVVRPS YVLGGRAMEI VYDDSRLITY LENAVQVDPE RPVLVDKYLS DAIEIDVDTL TDSYGNVVIG GIMEHIEQAG VHSGDSACML
0901: PTQTIPASCL QTIRTWTTKL AKKLNVCGLM NCQYAITTSG DVFLLEANPR ASRTVPFVSK AIGHPLAKYA ALVMSGKSLK DLNFEKEVIP KHVSVKEAVF
1001: PFEKFQGCDV ILGPEMRSTG EVMSISSEFS SAFAMAQIAA GQKLPLSGTV FLSLNDMTKP HLEKIAVSFL ELGFKIVATS GTAHFLELKG IPVERVLKLH
1101: EGRPHAADMV ANGQIHLMLI TSSGDALDQK DGRQLRQMAL AYKVPVITTV AGALATAEGI KSLKSSAIKM TALQDFFEVK NVSSLLV
Arabidopsis Description
CARBCarbamoyl-phosphate synthase large chain, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42601]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.