Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 9
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
19658398
nucleus: 21132161 endoplasmic reticulum: 27224218 endoplasmic reticulum: 28499913 mitochondrion: 28499913 |
msms PMID:
21132161
doi
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID:
19658398
doi
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41871 | Soybean | endoplasmic reticulum | 92.53 | 93.53 |
| PGSC0003DMT400036789 | Potato | cytosol | 38.26 | 78.19 |
| VIT_17s0000g02010.t01 | Wine grape | plasma membrane | 68.45 | 66.82 |
| KRH48661 | Soybean | nucleus | 67.38 | 64.62 |
| Os03t0712400-02 | Rice | plasma membrane | 22.1 | 64.44 |
| Solyc06g068910.2.1 | Tomato | plasma membrane | 61.59 | 63.72 |
| KRH39040 | Soybean | plasma membrane | 63.41 | 63.61 |
| PGSC0003DMT400074103 | Potato | plasma membrane | 62.5 | 63.27 |
| Solyc03g118510.2.1 | Tomato | nucleus | 63.26 | 62.78 |
| CDX95816 | Canola | plasma membrane | 56.4 | 62.71 |
| CDX92167 | Canola | plasma membrane | 59.45 | 62.5 |
| CDY67567 | Canola | plasma membrane | 55.49 | 62.44 |
| AT1G48480.1 | Thale cress | plasma membrane | 62.04 | 62.14 |
| CDY61284 | Canola | plasma membrane | 59.3 | 61.55 |
| Bra022250.1-P | Field mustard | plasma membrane | 58.99 | 61.33 |
| Bra014140.1-P | Field mustard | plasma membrane | 59.6 | 61.29 |
| AT3G17840.1 | Thale cress | plasma membrane | 60.37 | 61.21 |
| Bra021277.1-P | Field mustard | plasma membrane | 58.84 | 61.08 |
| CDY41827 | Canola | plasma membrane | 59.6 | 60.43 |
| CDX77309 | Canola | plasma membrane | 58.99 | 59.91 |
| GSMUA_Achr3P02160_001 | Banana | plasma membrane | 43.29 | 59.04 |
| GSMUA_Achr2P21610_001 | Banana | plasma membrane | 54.42 | 59.01 |
| GSMUA_Achr10P... | Banana | plasma membrane | 51.68 | 58.85 |
| GSMUA_Achr6P05910_001 | Banana | extracellular, plasma membrane, vacuole | 50.46 | 58.79 |
| KRH17350 | Soybean | extracellular | 55.79 | 58.65 |
| KRH72980 | Soybean | extracellular | 53.96 | 57.84 |
| GSMUA_Achr3P07440_001 | Banana | plasma membrane | 45.58 | 57.72 |
| GSMUA_Achr8P23000_001 | Banana | plasma membrane | 48.17 | 57.25 |
| KRH63039 | Soybean | cytosol | 22.87 | 56.82 |
| Zm00001d048053_P001 | Maize | plasma membrane | 57.62 | 56.5 |
| TraesCS4D01G241100.1 | Wheat | plasma membrane | 57.77 | 56.31 |
| Zm00001d048054_P002 | Maize | mitochondrion, plasma membrane | 57.16 | 55.8 |
| EER95247 | Sorghum | plasma membrane | 57.32 | 55.79 |
| GSMUA_Achr7P11160_001 | Banana | plasma membrane | 45.27 | 55.62 |
| Os03t0223000-02 | Rice | plasma membrane | 57.16 | 55.56 |
| GSMUA_Achr9P15690_001 | Banana | plasma membrane | 47.41 | 55.54 |
| TraesCS4A01G064200.1 | Wheat | plasma membrane | 57.16 | 54.99 |
| HORVU4Hr1G007550.1 | Barley | plasma membrane | 54.73 | 53.74 |
| TraesCS4D01G046900.1 | Wheat | plasma membrane | 54.88 | 53.65 |
| TraesCS4B01G047100.1 | Wheat | plasma membrane | 55.18 | 53.63 |
| TraesCS4B01G241500.1 | Wheat | plasma membrane | 51.07 | 53.17 |
| TraesCS4A01G267300.1 | Wheat | plasma membrane | 54.12 | 52.75 |
| KRH03778 | Soybean | endoplasmic reticulum | 50.76 | 51.23 |
| EER90996 | Sorghum | plasma membrane | 53.81 | 50.72 |
| Zm00001d033745_P001 | Maize | plasma membrane | 53.2 | 50.29 |
| KRH56662 | Soybean | plasma membrane | 48.63 | 49.92 |
| Os04t0463000-01 | Rice | plasma membrane | 49.54 | 48.58 |
| KRH54823 | Soybean | nucleus | 48.32 | 48.55 |
| TraesCS2B01G344900.1 | Wheat | plasma membrane | 49.24 | 48.43 |
| KXG26481 | Sorghum | plasma membrane | 49.54 | 48.36 |
| TraesCS2D01G325900.1 | Wheat | plasma membrane | 48.93 | 47.98 |
| Zm00001d013430_P001 | Maize | mitochondrion | 52.9 | 47.93 |
| TraesCS2A01G337000.1 | Wheat | plasma membrane | 48.78 | 47.83 |
| HORVU4Hr1G066900.1 | Barley | plasma membrane | 38.11 | 46.64 |
| Zm00001d003399_P001 | Maize | mitochondrion, plasma membrane | 48.02 | 46.53 |
| KRH00489 | Soybean | plasma membrane | 42.84 | 46.29 |
| KRH17210 | Soybean | nucleus | 46.19 | 46.26 |
| KRH72840 | Soybean | nucleus | 46.04 | 46.18 |
| TraesCS5D01G210800.1 | Wheat | plasma membrane | 45.12 | 45.68 |
| KRG98109 | Soybean | mitochondrion | 46.34 | 45.51 |
| KRH40666 | Soybean | plasma membrane | 42.07 | 45.47 |
| KRH53701 | Soybean | plasma membrane | 44.21 | 45.17 |
| HORVU0Hr1G012920.2 | Barley | cytosol | 35.06 | 45.1 |
| Zm00001d020403_P001 | Maize | plasma membrane | 44.05 | 45.09 |
| KRH64226 | Soybean | plasma membrane | 43.75 | 44.84 |
| TraesCS5B01G202900.1 | Wheat | plasma membrane | 44.36 | 44.56 |
| KRH60009 | Soybean | plasma membrane | 41.77 | 44.55 |
| KRH30670 | Soybean | plasma membrane | 45.43 | 44.41 |
| TraesCS5A01G205500.1 | Wheat | plasma membrane | 44.05 | 44.39 |
| KXG35590 | Sorghum | plasma membrane | 43.9 | 44.1 |
| HORVU2Hr1G080770.4 | Barley | mitochondrion, plasma membrane, plastid | 41.16 | 43.97 |
| Os09t0400500-01 | Rice | plasma membrane | 43.14 | 43.67 |
| TraesCS7D01G216400.1 | Wheat | plasma membrane | 42.38 | 43.37 |
| KRH27860 | Soybean | plasma membrane | 38.87 | 43.29 |
| HORVU7Hr1G043470.2 | Barley | plasma membrane | 42.23 | 43.28 |
| TraesCS7A01G214300.1 | Wheat | plasma membrane | 42.23 | 43.21 |
| TraesCS7B01G121600.1 | Wheat | plasma membrane | 41.92 | 42.9 |
| KRH41279 | Soybean | plasma membrane | 41.46 | 42.63 |
| KRH16952 | Soybean | plasma membrane | 42.23 | 42.62 |
| KRH72555 | Soybean | plasma membrane | 41.62 | 42.13 |
| EES15012 | Sorghum | plasma membrane | 41.92 | 41.98 |
| KRH35919 | Soybean | plasma membrane | 42.84 | 41.82 |
| Os08t0427600-00 | Rice | golgi, plasma membrane | 28.2 | 41.29 |
| Zm00001d032244_P001 | Maize | plasma membrane | 41.92 | 40.98 |
| KRH15987 | Soybean | plasma membrane | 38.41 | 40.45 |
| KRH18126 | Soybean | plasma membrane | 36.43 | 40.44 |
| KRG94239 | Soybean | vacuole | 39.02 | 39.88 |
| KRH77622 | Soybean | plasma membrane | 38.57 | 39.84 |
| KRH64513 | Soybean | plasma membrane | 38.41 | 39.81 |
| Zm00001d050355_P001 | Maize | plasma membrane | 42.07 | 39.71 |
| KRH38161 | Soybean | plasma membrane | 39.79 | 39.67 |
| KRH53424 | Soybean | plasma membrane | 38.26 | 39.65 |
| KRH67820 | Soybean | plasma membrane | 40.7 | 39.61 |
| KRG96115 | Soybean | plasma membrane | 41.01 | 37.21 |
| KRH20013 | Soybean | plasma membrane | 38.87 | 37.06 |
| KRG90862 | Soybean | mitochondrion | 36.59 | 35.82 |
| KRH32636 | Soybean | plasma membrane | 38.87 | 34.69 |
| KRH29251 | Soybean | plasma membrane, vacuole | 32.77 | 32.92 |
| KRH24246 | Soybean | plasma membrane | 32.77 | 32.23 |
| KRH57812 | Soybean | golgi, plasma membrane, plastid | 30.95 | 31.52 |
| KRH04550 | Soybean | plasma membrane | 30.79 | 30.98 |
| KRH61335 | Soybean | plasma membrane | 31.4 | 28.3 |
| KRH52034 | Soybean | cytosol, plasma membrane, plastid | 21.65 | 27.26 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:100818955 | MapMan:18.4.1.3 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EMBL:ACUP02003368 |
| EnsemblPlantsGene:GLYMA_05G247300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | UniProt:I1K5A7 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | EnsemblPlants:KRH60559 |
| ProteinID:KRH60559 | ProteinID:KRH60559.1 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt |
| PFAM:PF00069 | PFAM:PF08263 | PFAM:PF13855 | ScanProsite:PS00107 | PFscan:PS50011 | PFscan:PS51450 |
| PANTHER:PTHR27008 | PANTHER:PTHR27008:SF19 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SUPFAM:SSF52058 | SUPFAM:SSF56112 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001CA94E6 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:-:42069523..42072326
Molecular Weight (calculated)
70961.2 Da
IEP (calculated)
6.795
GRAVY (calculated)
-0.031
Length
656 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPHKHTLVV VATVATLALA AVLAAPQADL ASERAALLSL RSSVGGRTLF WNATRDSPCN WAGVQCEHGH VVELHLPGVA LSGEIPVGIF GNLTQLRTLS
101: LRFNALRGSL PSDLASCVNL RNLYIQRNLL TGQIPPFLFH LPDLVRLNMG FNNFSGPFPS AFNNLTRLKT LFLENNQLSG PIPDLNKLTL DQFNVSDNLL
201: NGSVPLKLQT FPQDSFLGNS LCGRPLSLCP GDVADPLSVD NNAKGNNNDN KKNKLSGGAI AGIVVGSVVF LLLLVFLLIF LCRNKSAKNT SAVDIATVKH
301: PETESEVLAD KGVSDVENGG HANVNPAIAS VAAVAAGNGG SKAEGNAKKL VFFGNAARAF DLEDLLRASA EVLGKGTFGT AYKAVLEAGP VVAVKRLKDV
401: TISEKEFKEK IEAVGAMDHE SLVPLRAYYF SRDEKLLVYD YMPMGSLSAL LHGNKGAGRT PLNWEVRSGI ALGAARGIEY LHSRGPNVSH GNIKSSNILL
501: TKSYDARVSD FGLAHLVGPS STPNRVAGYR APEVTDPRKV SQMADVYSFG VLLLELLTGK APTHALLNEE GVDLPRWVQS VVREEWTSEV FDLELLRYQN
601: VEEEMVQLLQ LAVDCAAQYP DKRPSMSEVV RSIQELRRSS LKEDQDQIQH DNDILL
101: LRFNALRGSL PSDLASCVNL RNLYIQRNLL TGQIPPFLFH LPDLVRLNMG FNNFSGPFPS AFNNLTRLKT LFLENNQLSG PIPDLNKLTL DQFNVSDNLL
201: NGSVPLKLQT FPQDSFLGNS LCGRPLSLCP GDVADPLSVD NNAKGNNNDN KKNKLSGGAI AGIVVGSVVF LLLLVFLLIF LCRNKSAKNT SAVDIATVKH
301: PETESEVLAD KGVSDVENGG HANVNPAIAS VAAVAAGNGG SKAEGNAKKL VFFGNAARAF DLEDLLRASA EVLGKGTFGT AYKAVLEAGP VVAVKRLKDV
401: TISEKEFKEK IEAVGAMDHE SLVPLRAYYF SRDEKLLVYD YMPMGSLSAL LHGNKGAGRT PLNWEVRSGI ALGAARGIEY LHSRGPNVSH GNIKSSNILL
501: TKSYDARVSD FGLAHLVGPS STPNRVAGYR APEVTDPRKV SQMADVYSFG VLLLELLTGK APTHALLNEE GVDLPRWVQS VVREEWTSEV FDLELLRYQN
601: VEEEMVQLLQ LAVDCAAQYP DKRPSMSEVV RSIQELRRSS LKEDQDQIQH DNDILL
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.