Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06973 | Soybean | nucleus | 82.86 | 81.53 |
| KRH57661 | Soybean | nucleus | 52.24 | 59.81 |
| KRG94300 | Soybean | nucleus | 53.47 | 58.48 |
| Solyc03g005030.2.1 | Tomato | nucleus | 36.73 | 44.12 |
| VIT_14s0171g00120.t01 | Wine grape | nucleus | 44.08 | 43.72 |
| PGSC0003DMT400034925 | Potato | nucleus, plastid | 36.73 | 43.48 |
| PGSC0003DMT400052231 | Potato | nucleus, plastid | 33.47 | 34.6 |
| GSMUA_Achr7P22880_001 | Banana | nucleus, plastid | 32.24 | 34.05 |
| Solyc02g094030.2.1 | Tomato | nucleus | 32.65 | 33.76 |
| GSMUA_Achr10P... | Banana | nucleus | 31.84 | 33.62 |
| Bra025258.1-P | Field mustard | nucleus | 26.12 | 31.84 |
| Os01t0920100-01 | Rice | nucleus | 29.39 | 31.17 |
| GSMUA_Achr5P25150_001 | Banana | nucleus | 30.2 | 30.71 |
| TraesCS3A01G427500.1 | Wheat | nucleus | 28.16 | 29.74 |
| HORVU2Hr1G068780.1 | Barley | cytosol, nucleus | 17.96 | 29.73 |
| TraesCS3D01G423100.1 | Wheat | nucleus | 27.76 | 29.69 |
| Zm00001d012031_P001 | Maize | nucleus | 27.35 | 29.39 |
| HORVU3Hr1G094210.2 | Barley | nucleus | 27.76 | 29.31 |
| Zm00001d042341_P001 | Maize | nucleus | 28.16 | 29.24 |
| TraesCS2A01G280800.1 | Wheat | mitochondrion, nucleus | 22.04 | 29.19 |
| AT3G27210.1 | Thale cress | nucleus, plastid | 27.76 | 29.06 |
| Zm00001d004015_P001 | Maize | nucleus | 21.63 | 28.96 |
| EES01966 | Sorghum | nucleus | 26.94 | 28.82 |
| EES12001 | Sorghum | nucleus | 22.45 | 28.8 |
| TraesCS3B01G464600.1 | Wheat | nucleus | 26.94 | 28.7 |
| CDY34170 | Canola | nucleus, plastid | 28.16 | 28.51 |
| TraesCS2B01G298200.2 | Wheat | mitochondrion, nucleus | 22.04 | 28.42 |
| TraesCS2D01G279600.1 | Wheat | mitochondrion, nucleus | 21.22 | 28.42 |
| Bra032988.1-P | Field mustard | nucleus, plastid | 18.78 | 27.88 |
| CDY28483 | Canola | nucleus, plastid | 27.35 | 27.8 |
| CDX83668 | Canola | nucleus | 26.94 | 26.83 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 28.16 | 25.94 |
| CDY13691 | Canola | nucleus | 26.53 | 25.39 |
| GSMUA_Achr6P20760_001 | Banana | nucleus | 21.22 | 24.88 |
| AT5G40860.1 | Thale cress | nucleus | 24.9 | 24.8 |
| GSMUA_Achr6P12330_001 | Banana | plastid | 29.8 | 24.09 |
| CDY36389 | Canola | nucleus | 22.04 | 21.95 |
| Os04t0380200-01 | Rice | mitochondrion, plastid | 23.27 | 19.86 |
| Bra025539.1-P | Field mustard | nucleus | 20.0 | 19.68 |
| CDY52698 | Canola | nucleus | 18.78 | 15.86 |
Protein Annotations
| EMBL:ACUP02011966 | EnsemblPlants:KRG94493 | EnsemblPlantsGene:GLYMA_19G088700 | EntrezGene:100786649 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:At3g27210-like | PANTHER:PTHR34280 | PANTHER:PTHR34280:SF2 | ProteinID:KRG94493 | ProteinID:KRG94493.1 |
| SEG:seg | UniParc:UPI0001BA89D0 | UniProt:A0A0R0EJN2 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr19:+:31651828..31655579
Molecular Weight (calculated)
26999.0 Da
IEP (calculated)
6.166
GRAVY (calculated)
-0.869
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLCSSVHRN EQTNMKHLTL SFESKTESLV IPPSPFKDKD KAINGNFVVA DDDAAFKAQQ WSPSRSTTTF SVTDCGDNDG KEESFFDSKA WLDSDCDDDF
101: YSVKGEFTPS RGSTPVHHIF LNKTTPSEPG SVPEPSPTTQ KKKLLDLFRE SVRENQSDAE NTSEIEKKEV KPTTVHDPKS AHSTPYVSGG NSACSSERTM
201: NDDHAPIREK PVKSVQCCLP SLASCRSFSE RKRKTSPAIT DNGKA
101: YSVKGEFTPS RGSTPVHHIF LNKTTPSEPG SVPEPSPTTQ KKKLLDLFRE SVRENQSDAE NTSEIEKKEV KPTTVHDPKS AHSTPYVSGG NSACSSERTM
201: NDDHAPIREK PVKSVQCCLP SLASCRSFSE RKRKTSPAIT DNGKA
001: MGSCVSSSQS KSSSASDSVV KLASFISKPD STPPLKTDVM ITSSTINGNP PIDSGRWDSG NKEDMIFFDS RGWLDSDCDD DFMSVGGEFT PSRGTTPVHH
101: KFCDQTPHQG EENKHGEEEE EASPTDNKKR LLELFKETQD EEDEEEEDYV AEGKARACLW IRTPVRSSAP ATPYNNNKER QQKFKRVRSA ALGRCVPRLV
201: SCSSFTDRRR NMMTSHAPID VQR
101: KFCDQTPHQG EENKHGEEEE EASPTDNKKR LLELFKETQD EEDEEEEDYV AEGKARACLW IRTPVRSSAP ATPYNNNKER QQKFKRVRSA ALGRCVPRLV
201: SCSSFTDRRR NMMTSHAPID VQR
Arabidopsis Description
Uncharacterized protein At3g01860 [Source:UniProtKB/TrEMBL;Acc:Q0WMJ7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.