Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY28483 | Canola | nucleus, plastid | 84.71 | 85.06 |
Bra032988.1-P | Field mustard | nucleus, plastid | 57.44 | 84.24 |
CDX83668 | Canola | nucleus | 71.9 | 70.73 |
AT3G27210.1 | Thale cress | nucleus, plastid | 56.61 | 58.55 |
CDY13691 | Canola | nucleus | 54.96 | 51.95 |
CDY36389 | Canola | nucleus | 45.04 | 44.31 |
KRH57661 | Soybean | nucleus | 29.75 | 33.64 |
KRG94300 | Soybean | nucleus | 29.34 | 31.7 |
VIT_14s0171g00120.t01 | Wine grape | nucleus | 31.82 | 31.17 |
EES12001 | Sorghum | nucleus | 23.97 | 30.37 |
CDY52698 | Canola | nucleus | 34.71 | 28.97 |
KRG94493 | Soybean | peroxisome | 28.51 | 28.16 |
KRH06973 | Soybean | nucleus | 28.93 | 28.11 |
Zm00001d004015_P001 | Maize | nucleus | 21.07 | 27.87 |
HORVU2Hr1G068780.1 | Barley | cytosol, nucleus | 16.94 | 27.7 |
Os01t0920100-01 | Rice | nucleus | 26.03 | 27.27 |
CDX74323 | Canola | nucleus, plastid | 23.55 | 26.51 |
TraesCS2D01G279600.1 | Wheat | mitochondrion, nucleus | 19.83 | 26.23 |
TraesCS2A01G280800.1 | Wheat | mitochondrion, nucleus | 19.83 | 25.95 |
Zm00001d012031_P001 | Maize | nucleus | 24.38 | 25.88 |
Zm00001d042341_P001 | Maize | nucleus | 25.21 | 25.85 |
EES01966 | Sorghum | nucleus | 24.38 | 25.76 |
CDX91922 | Canola | plastid | 22.31 | 25.0 |
TraesCS2B01G298200.2 | Wheat | mitochondrion, nucleus | 19.42 | 24.74 |
GSMUA_Achr10P... | Banana | nucleus | 22.73 | 23.71 |
HORVU3Hr1G094210.2 | Barley | nucleus | 22.73 | 23.71 |
GSMUA_Achr7P22880_001 | Banana | nucleus, plastid | 22.73 | 23.71 |
TraesCS3B01G464600.1 | Wheat | nucleus | 22.31 | 23.48 |
GSMUA_Achr6P20760_001 | Banana | nucleus | 19.83 | 22.97 |
TraesCS3A01G427500.1 | Wheat | nucleus | 21.9 | 22.84 |
TraesCS3D01G423100.1 | Wheat | nucleus | 21.49 | 22.71 |
GSMUA_Achr5P25150_001 | Banana | nucleus | 21.07 | 21.16 |
GSMUA_AchrUn_... | Banana | mitochondrion | 20.25 | 18.42 |
Os04t0380200-01 | Rice | mitochondrion, plastid | 21.07 | 17.77 |
GSMUA_Achr6P12330_001 | Banana | plastid | 21.49 | 17.16 |
Protein Annotations
EnsemblPlants:CDY34170 | EnsemblPlantsGene:GSBRNA2T00056151001 | InterPro:At3g27210-like | PANTHER:PTHR34280 | PANTHER:PTHR34280:SF2 | ProteinID:CDY34170 |
ProteinID:CDY34170.1 | SEG:seg | UniParc:UPI0004EE952B | UniProt:A0A078H6H9 | MapMan:35.1 | : |
Description
BnaA02g28700DBnaA02g28700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6H9]
Coordinates
chrLK032330:+:145506..147510
Molecular Weight (calculated)
26597.6 Da
IEP (calculated)
10.484
GRAVY (calculated)
-0.972
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSSSLNK SPFRTDNMVT PESPTKDISS VEKNDAVVSI VSNSSPSTKK TFESPRKSTT SIPPVTSPAV KSRWSFSSSK KSFGSKDETF FDTQQWLQSD
101: SDDDFHSVNG DFTPSRGNTP KCSFSDRPPR IQSLRFQDKK SSRGSSPAPR PRRKKLGELF RDSIRERPEE SSGASSALSS PYLSVANSGE FSKAAIEDAG
201: VKEQKKSNRQ HHRCLPSFSS CGGSFMERRK KMSSETAVDT VK
101: SDDDFHSVNG DFTPSRGNTP KCSFSDRPPR IQSLRFQDKK SSRGSSPAPR PRRKKLGELF RDSIRERPEE SSGASSALSS PYLSVANSGE FSKAAIEDAG
201: VKEQKKSNRQ HHRCLPSFSS CGGSFMERRK KMSSETAVDT VK
001: MGSSSSSSLN NSPIRADSMV TPESQMTVND NKNDNVSILS PSVKKSFESP RKSTSIPANN NLTPVKSRWS FSSSKKSFGS KDETFFDSQP WLQSDSDDDF
101: HSVNGDFTPS LGNTPKSSFS DRPPRFHNLI FHEKKPSRGS SSPAPLPRRK KLGELFRDSI REEREESGSS SAISTPYLSG ANSREFNDTA IEKEEKKKSN
201: WHHHRCLPGF SSCGGSFMER RKKMSSETPV VAVK
101: HSVNGDFTPS LGNTPKSSFS DRPPRFHNLI FHEKKPSRGS SSPAPLPRRK KLGELFRDSI REEREESGSS SAISTPYLSG ANSREFNDTA IEKEEKKKSN
201: WHHHRCLPGF SSCGGSFMER RKKMSSETPV VAVK
Arabidopsis Description
Y-2Uncharacterized protein At3g27210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK32]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.