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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 3
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28483 Canola nucleus, plastid 84.71 85.06
Bra032988.1-P Field mustard nucleus, plastid 57.44 84.24
CDX83668 Canola nucleus 71.9 70.73
AT3G27210.1 Thale cress nucleus, plastid 56.61 58.55
CDY13691 Canola nucleus 54.96 51.95
CDY36389 Canola nucleus 45.04 44.31
KRH57661 Soybean nucleus 29.75 33.64
KRG94300 Soybean nucleus 29.34 31.7
VIT_14s0171g00120.t01 Wine grape nucleus 31.82 31.17
EES12001 Sorghum nucleus 23.97 30.37
CDY52698 Canola nucleus 34.71 28.97
KRG94493 Soybean peroxisome 28.51 28.16
KRH06973 Soybean nucleus 28.93 28.11
Zm00001d004015_P001 Maize nucleus 21.07 27.87
HORVU2Hr1G068780.1 Barley cytosol, nucleus 16.94 27.7
Os01t0920100-01 Rice nucleus 26.03 27.27
CDX74323 Canola nucleus, plastid 23.55 26.51
TraesCS2D01G279600.1 Wheat mitochondrion, nucleus 19.83 26.23
TraesCS2A01G280800.1 Wheat mitochondrion, nucleus 19.83 25.95
Zm00001d012031_P001 Maize nucleus 24.38 25.88
Zm00001d042341_P001 Maize nucleus 25.21 25.85
EES01966 Sorghum nucleus 24.38 25.76
CDX91922 Canola plastid 22.31 25.0
TraesCS2B01G298200.2 Wheat mitochondrion, nucleus 19.42 24.74
GSMUA_Achr10P... Banana nucleus 22.73 23.71
HORVU3Hr1G094210.2 Barley nucleus 22.73 23.71
GSMUA_Achr7P22880_001 Banana nucleus, plastid 22.73 23.71
TraesCS3B01G464600.1 Wheat nucleus 22.31 23.48
GSMUA_Achr6P20760_001 Banana nucleus 19.83 22.97
TraesCS3A01G427500.1 Wheat nucleus 21.9 22.84
TraesCS3D01G423100.1 Wheat nucleus 21.49 22.71
GSMUA_Achr5P25150_001 Banana nucleus 21.07 21.16
GSMUA_AchrUn_... Banana mitochondrion 20.25 18.42
Os04t0380200-01 Rice mitochondrion, plastid 21.07 17.77
GSMUA_Achr6P12330_001 Banana plastid 21.49 17.16
Protein Annotations
EnsemblPlants:CDY34170EnsemblPlantsGene:GSBRNA2T00056151001InterPro:At3g27210-likePANTHER:PTHR34280PANTHER:PTHR34280:SF2ProteinID:CDY34170
ProteinID:CDY34170.1SEG:segUniParc:UPI0004EE952BUniProt:A0A078H6H9MapMan:35.1:
Description
BnaA02g28700DBnaA02g28700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6H9]
Coordinates
chrLK032330:+:145506..147510
Molecular Weight (calculated)
26597.6 Da
IEP (calculated)
10.484
GRAVY (calculated)
-0.972
Length
242 amino acids
Sequence
(BLAST)
001: MGSSSSSLNK SPFRTDNMVT PESPTKDISS VEKNDAVVSI VSNSSPSTKK TFESPRKSTT SIPPVTSPAV KSRWSFSSSK KSFGSKDETF FDTQQWLQSD
101: SDDDFHSVNG DFTPSRGNTP KCSFSDRPPR IQSLRFQDKK SSRGSSPAPR PRRKKLGELF RDSIRERPEE SSGASSALSS PYLSVANSGE FSKAAIEDAG
201: VKEQKKSNRQ HHRCLPSFSS CGGSFMERRK KMSSETAVDT VK
Best Arabidopsis Sequence Match ( AT3G27210.1 )
(BLAST)
001: MGSSSSSSLN NSPIRADSMV TPESQMTVND NKNDNVSILS PSVKKSFESP RKSTSIPANN NLTPVKSRWS FSSSKKSFGS KDETFFDSQP WLQSDSDDDF
101: HSVNGDFTPS LGNTPKSSFS DRPPRFHNLI FHEKKPSRGS SSPAPLPRRK KLGELFRDSI REEREESGSS SAISTPYLSG ANSREFNDTA IEKEEKKKSN
201: WHHHRCLPGF SSCGGSFMER RKKMSSETPV VAVK
Arabidopsis Description
Y-2Uncharacterized protein At3g27210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK32]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.