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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70170
CDX73731
CDX75951
CDX77995
CDX80239
CDX80954
CDX83668
CDX88900
CDX92551
CDX95565
CDX98822
CDY02581
CDY13691
CDY13981
CDY28483
CDY32292
CDY34170
CDY47200
CDY51925
CDY52144
CDY59012
CDY59022
CDY59615

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G17840.1 CDX75951 AT3G17950.1 15618630
AT3G17840.1 CDX95565 AT3G17950.1 15618630
AT3G17840.1 CDY51925 AT3G17950.1 15618630
AT3G17840.1 CDX83668 AT3G27210.1 15618630
AT3G17840.1 CDY13691 AT3G27210.1 15618630
AT3G17840.1 CDY28483 AT3G27210.1 15618630
AT3G17840.1 CDY34170 AT3G27210.1 15618630
AT3G17840.1 CDX73731 AT3G51310.1 15618630
AT3G17840.1 CDX77995 AT3G51310.1 15618630
AT3G17840.1 CDY59615 AT3G51310.1 15618630
AT3G17840.1 CDX70170 AT5G05190.1 15618630
AT3G17840.1 CDX80954 AT5G05190.1 15618630
AT3G17840.1 CDX98822 AT5G05190.1 15618630
AT3G17840.1 CDY52144 AT5G05190.1 15618630
AT3G17840.1 CDX80239 AT5G19140.1 15618630
AT3G17840.1 CDX88900 AT5G19140.1 15618630
AT3G17840.1 CDX92551 AT5G19140.1 15618630
AT3G17840.1 CDY02581 AT5G19140.1 15618630
AT3G17840.1 CDY13981 AT5G19140.1 15618630
AT3G17840.1 CDY32292 AT5G19140.1 15618630
AT3G17840.1 CDY47200 AT5G19140.1 15618630
AT3G17840.1 CDY59012 AT5G19140.1 15618630
AT3G17840.1 CDY59022 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021277.1-P Field mustard plasma membrane 99.37 99.37
CDY67567 Canola plasma membrane 90.66 98.28
CDX92167 Canola plasma membrane 84.65 85.74
CDX95816 Canola plasma membrane 79.75 85.42
AT3G17840.1 Thale cress plasma membrane 85.28 83.31
CDY41827 Canola plasma membrane 73.42 71.72
CDX77309 Canola plasma membrane 72.78 71.21
PGSC0003DMT400036789 Potato cytosol 32.91 64.8
KRH41871 Soybean endoplasmic reticulum 60.92 59.32
KRH60559 Soybean endoplasmic reticulum 61.55 59.3
Solyc06g068910.2.1 Tomato plasma membrane 58.86 58.68
PGSC0003DMT400074103 Potato plasma membrane 59.49 58.02
VIT_17s0000g02010.t01 Wine grape plasma membrane 61.55 57.89
GSMUA_Achr2P21610_001 Banana plasma membrane 53.01 55.37
Solyc03g118510.2.1 Tomato nucleus 57.91 55.37
Os03t0712400-02 Rice plasma membrane 19.15 53.78
GSMUA_Achr10P... Banana plasma membrane 48.26 52.95
KRH48661 Soybean nucleus 57.28 52.92
GSMUA_Achr3P07440_001 Banana plasma membrane 43.04 52.51
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 46.52 52.22
GSMUA_Achr3P02160_001 Banana plasma membrane 39.72 52.18
KRH39040 Soybean plasma membrane 53.96 52.14
GSMUA_Achr8P23000_001 Banana plasma membrane 45.41 51.99
CDX85498 Canola plasma membrane 49.84 51.39
CDY38103 Canola plasma membrane 49.68 51.22
CDY51524 Canola plasma membrane 50.16 51.13
CDX69441 Canola plasma membrane 49.84 50.97
GSMUA_Achr7P11160_001 Banana plasma membrane 43.04 50.94
CDY49655 Canola plasma membrane 49.68 50.89
Zm00001d048053_P001 Maize plasma membrane 53.8 50.82
Os03t0223000-02 Rice plasma membrane 53.96 50.52
CDY28719 Canola plasma membrane 48.26 50.5
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 53.64 50.45
HORVU4Hr1G007550.1 Barley plasma membrane 53.16 50.3
TraesCS4D01G046900.1 Wheat plasma membrane 53.32 50.22
TraesCS4B01G047100.1 Wheat plasma membrane 53.64 50.22
EER95247 Sorghum plasma membrane 53.48 50.15
GSMUA_Achr9P15690_001 Banana plasma membrane 44.3 50.0
TraesCS4A01G267300.1 Wheat plasma membrane 53.16 49.93
TraesCS4D01G241100.1 Wheat plasma membrane 53.16 49.93
TraesCS4A01G064200.1 Wheat plasma membrane 52.53 48.68
TraesCS4B01G241500.1 Wheat plasma membrane 48.42 48.57
EER90996 Sorghum plasma membrane 52.22 47.41
Zm00001d033745_P001 Maize plasma membrane 51.9 47.26
CDY03526 Canola cytosol 18.99 46.88
Os04t0463000-01 Rice plasma membrane 49.37 46.64
TraesCS2B01G344900.1 Wheat plasma membrane 49.21 46.63
TraesCS2D01G325900.1 Wheat plasma membrane 49.21 46.49
TraesCS2A01G337000.1 Wheat plasma membrane 49.05 46.34
Zm00001d020403_P001 Maize plasma membrane 46.36 45.71
Zm00001d013430_P001 Maize mitochondrion 52.22 45.58
CDX77054 Canola plasma membrane 44.46 45.54
KXG26481 Sorghum plasma membrane 48.42 45.54
Os09t0400500-01 Rice plasma membrane 46.36 45.22
TraesCS7D01G216400.1 Wheat plasma membrane 45.73 45.09
TraesCS5D01G210800.1 Wheat plasma membrane 46.2 45.06
KXG35590 Sorghum plasma membrane 46.52 45.02
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 48.1 44.9
HORVU7Hr1G043470.2 Barley plasma membrane 45.41 44.84
CDY10964 Canola cytosol 10.28 44.83
TraesCS5B01G202900.1 Wheat plasma membrane 46.2 44.72
HORVU0Hr1G012920.2 Barley cytosol 36.08 44.71
TraesCS5A01G205500.1 Wheat plasma membrane 46.04 44.7
TraesCS7A01G214300.1 Wheat plasma membrane 45.25 44.62
CDY48185 Canola plasma membrane 46.36 44.6
TraesCS7B01G121600.1 Wheat plasma membrane 45.09 44.46
CDY04464 Canola plasma membrane 44.15 44.15
HORVU4Hr1G066900.1 Barley plasma membrane 37.34 44.03
CDY27986 Canola plasma membrane 43.67 43.74
CDY35996 Canola plasma membrane 43.83 43.62
CDX88667 Canola plasma membrane 42.72 43.2
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 41.93 43.16
EES15012 Sorghum plasma membrane 44.3 42.75
CDY02808 Canola plastid 28.32 42.52
CDY58565 Canola plasma membrane 43.83 42.42
CDY32713 Canola plasma membrane 43.04 41.78
CDY25569 Canola mitochondrion 22.31 41.72
CDX70172 Canola plasma membrane 41.14 41.67
CDX98821 Canola plasma membrane 41.3 41.56
CDY34407 Canola mitochondrion 22.31 41.47
CDX94213 Canola plasma membrane 40.35 41.46
Zm00001d032244_P001 Maize plasma membrane 43.51 40.98
Os08t0427600-00 Rice golgi, plasma membrane 28.96 40.85
Zm00001d050355_P001 Maize plasma membrane 44.46 40.43
CDY35028 Canola mitochondrion 15.03 40.25
CDY38186 Canola plasma membrane 37.5 40.1
CDY08366 Canola plasma membrane 37.34 40.07
CDX87143 Canola plasma membrane 38.92 39.61
CDX81508 Canola plasma membrane 40.19 39.26
CDY44903 Canola plasma membrane 37.34 39.14
CDY19849 Canola plasma membrane 38.45 39.13
CDX84553 Canola plasma membrane 40.66 39.12
CDX79688 Canola plasma membrane 39.72 38.98
CDY47625 Canola plasma membrane 40.66 38.82
CDX71488 Canola plasma membrane 44.15 38.17
CDY47068 Canola plasma membrane 35.92 37.96
CDY54343 Canola plasma membrane 35.6 37.69
CDY22372 Canola cytosol 16.93 36.27
CDX71536 Canola cytosol 16.77 35.93
CDX67503 Canola cytosol, mitochondrion 21.68 35.68
CDY34130 Canola cytosol, plastid 32.75 33.6
CDX97916 Canola plasma membrane 34.97 33.48
CDY24545 Canola plasma membrane 34.02 33.39
CDY19325 Canola plasma membrane 33.7 32.87
CDX83117 Canola plasma membrane 33.7 32.52
CDX68581 Canola plasma membrane 33.39 32.31
CDX81336 Canola plasma membrane 31.8 32.26
CDY01430 Canola plasma membrane 33.7 31.14
CDX71537 Canola extracellular 12.03 26.67
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078JB60UniProt:A0A078JB60
EnsemblPlants:CDY61284ProteinID:CDY61284ProteinID:CDY61284.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00033635001InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069
PFAM:PF08263PFAM:PF13855ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF19
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EEF287SEG:seg::::
Description
BnaA01g36890DBnaA01g36890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JB60]
Coordinates
chrLK033979:+:14278..16879
Molecular Weight (calculated)
68205.1 Da
IEP (calculated)
5.340
GRAVY (calculated)
-0.040
Length
632 amino acids
Sequence
(BLAST)
001: MTPSMASSLS TFLSILLLLS LPIPSTQDLA ADKSALLSLR SAVGGRTFLW NTEQTTPCNW TGVACDGANR VTALRLPGFA LSGNIPEGIF GNLTNLRTLS
101: LRLNALTGSL PLDLGACADL RRLYLQGNRF SGEIPPLLFG LSNLVRLDLG ENEFTGEISS GFKNLTRLKT LYLENNKLSG SLLDLGLGLG LGLGLDQFNV
201: SNNSLNGSIP KSLQKFDSDS FLGTSLCGKP LGACSDEGTV PSQPISVGNI PGKRKSKLSG GAIAGIVIGC VVGFLLIILV LMVLFRRKGD ERTRAVDVET
301: IKQLEIEVPG EKTAVEANEP STAAVNSSGA RKLVFFGNAT KVFELEDLLR ASAEVLGKGT FGTAYKAVLD AATMVAVKRL KDVTMADREF KEKIEVVGAM
401: DHENLVPLRA YYCSGDEKLL VYDFMPMGSL SALLHGNKGA GRSPLDWEVR ARIALGAARG LDYLHSQDPL SSHGNVKSSN ILLTNSHDAR VSDFGLAQLV
501: GSSSATPNRV TGYRAPEVTD PSRVSQKADV YSFGVVLLEL LTGKAPSNSV MNEEGMDLAR WVHSVEREEW RREVFDSELM SLERVDSVEG EMEEMLQLGI
601: DCTEQHPDKR PVMVEVVRRI QELRQPGSEL VD
Best Arabidopsis Sequence Match ( AT3G17840.1 )
(BLAST)
001: MRLFFTPSMS NLSIFFSILL LSLPLPSIGD LAADKSALLS FRSAVGGRTL LWDVKQTSPC NWTGVLCDGG RVTALRLPGE TLSGHIPEGI FGNLTQLRTL
101: SLRLNGLTGS LPLDLGSCSD LRRLYLQGNR FSGEIPEVLF SLSNLVRLNL AENEFSGEIS SGFKNLTRLK TLYLENNKLS GSLLDLDLSL DQFNVSNNLL
201: NGSIPKSLQK FDSDSFVGTS LCGKPLVVCS NEGTVPSQPI SVGNIPGTVE GSEEKKKRKK LSGGAIAGIV IGCVVGLSLI VMILMVLFRK KGNERTRAID
301: LATIKHHEVE IPGEKAAVEA PENRSYVNEY SPSAVKAVEV NSSGMKKLVF FGNATKVFDL EDLLRASAEV LGKGTFGTAY KAVLDAVTLV AVKRLKDVTM
401: ADREFKEKIE VVGAMDHENL VPLRAYYYSG DEKLLVYDFM PMGSLSALLH GNKGAGRPPL NWEVRSGIAL GAARGLDYLH SQDPLSSHGN VKSSNILLTN
501: SHDARVSDFG LAQLVSASST TPNRATGYRA PEVTDPRRVS QKADVYSFGV VLLELLTGKA PSNSVMNEEG MDLARWVHSV AREEWRNEVF DSELMSIETV
601: VSVEEEMAEM LQLGIDCTEQ HPDKRPVMVE VVRRIQELRQ SGADRVG
Arabidopsis Description
RLK902Probable inactive receptor kinase RLK902 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVI6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.