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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane, plastid
Any Predictor:mitochondrion, plasma membrane, plastid
ChloroP:plastid
MultiLoc:mitochondrion
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU2Hr1G068780.1
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU3Hr1G094210.2
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G040970.1
HORVU5Hr1G044710.4
HORVU6Hr1G073560.1
HORVU7Hr1G081830.7

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 HORVU6Hr1G073560.1 AT3G17950.1 15618630
AT1G48480.1 HORVU2Hr1G068780.1 AT3G27210.1 15618630
AT1G48480.1 HORVU3Hr1G094210.2 AT3G27210.1 15618630
AT3G02880.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT3G02880.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT3G02880.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT3G02880.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT3G02880.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT3G02880.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT3G02880.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT3G02880.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT3G02880.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT3G02880.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
AT3G17840.1 HORVU6Hr1G073560.1 AT3G17950.1 15618630
AT3G17840.1 HORVU2Hr1G068780.1 AT3G27210.1 15618630
AT3G17840.1 HORVU3Hr1G094210.2 AT3G27210.1 15618630
AT3G17840.1 HORVU7Hr1G081830.7 AT3G51310.1 15618630
AT3G17840.1 HORVU5Hr1G040970.1 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G344900.1 Wheat plasma membrane 88.76 81.71
TraesCS2A01G337000.1 Wheat plasma membrane 88.6 81.32
TraesCS2D01G325900.1 Wheat plasma membrane 88.6 81.32
Os04t0463000-01 Rice plasma membrane 74.1 68.01
KXG26481 Sorghum plasma membrane 73.13 66.82
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 73.45 66.62
PGSC0003DMT400036789 Potato cytosol 25.57 48.91
GSMUA_Achr2P21610_001 Banana plasma membrane 42.35 42.98
VIT_14s0006g01080.t01 Wine grape plasma membrane 44.3 42.57
CDY67567 Canola plasma membrane 40.39 42.54
CDX95816 Canola plasma membrane 40.55 42.2
CDX92167 Canola plasma membrane 42.67 41.99
Bra021277.1-P Field mustard plasma membrane 43.16 41.93
CDY61284 Canola plasma membrane 43.16 41.93
AT3G17840.1 Thale cress plasma membrane 44.14 41.89
KRH41871 Soybean endoplasmic reticulum 44.14 41.76
GSMUA_Achr10P... Banana plasma membrane 39.09 41.67
Bra022250.1-P Field mustard plasma membrane 42.51 41.36
HORVU4Hr1G007550.1 Barley plasma membrane 44.79 41.17
KRH60559 Soybean endoplasmic reticulum 43.97 41.16
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 37.62 41.03
Solyc06g068910.2.1 Tomato plasma membrane 42.35 41.01
Solyc11g011020.1.1 Tomato nucleus 42.83 40.97
VIT_17s0000g02010.t01 Wine grape plasma membrane 44.79 40.92
PGSC0003DMT400040459 Potato plasma membrane 42.83 40.65
Bra014140.1-P Field mustard plasma membrane 42.18 40.6
PGSC0003DMT400074103 Potato plasma membrane 42.83 40.59
CDX77309 Canola plasma membrane 42.18 40.09
CDY41827 Canola plasma membrane 42.18 40.03
KRH17350 Soybean extracellular 40.55 39.9
KRH48661 Soybean nucleus 44.3 39.77
AT1G48480.1 Thale cress plasma membrane 42.35 39.69
GSMUA_Achr3P02160_001 Banana plasma membrane 30.94 39.5
HORVU0Hr1G012920.2 Barley cytosol 32.41 39.02
KRH72980 Soybean extracellular 38.76 38.89
Solyc03g118510.2.1 Tomato nucleus 41.53 38.58
Bra021408.1-P Field mustard plasma membrane 38.11 38.42
CDY51524 Canola plasma membrane 38.76 38.39
CDY28719 Canola plasma membrane 37.62 38.24
Bra040609.1-P Field mustard plasma membrane 38.76 38.2
KRH39040 Soybean plasma membrane 40.55 38.07
CDX85498 Canola plasma membrane 37.95 38.01
Bra023574.1-P Field mustard plasma membrane 37.95 38.01
Bra008611.1-P Field mustard plasma membrane 38.11 37.93
CDX69441 Canola plasma membrane 37.95 37.7
CDY38103 Canola plasma membrane 37.62 37.68
HORVU2Hr1G017650.1 Barley plasma membrane 39.09 37.68
AT5G16590.1 Thale cress plasma membrane 38.27 37.6
HORVU7Hr1G043470.2 Barley plasma membrane 39.09 37.5
CDY49655 Canola plasma membrane 37.62 37.44
AT3G02880.1 Thale cress plasma membrane 37.95 37.16
GSMUA_Achr7P11160_001 Banana plasma membrane 32.08 36.89
HORVU3Hr1G053300.1 Barley plasma membrane 39.25 35.97
HORVU4Hr1G066900.1 Barley plasma membrane 30.94 35.45
HORVU3Hr1G080740.1 Barley plasma membrane 36.48 35.44
HORVU4Hr1G050770.1 Barley plasma membrane 36.16 34.85
HORVU5Hr1G007340.7 Barley plasma membrane 38.11 34.77
HORVU3Hr1G089490.3 Barley plasma membrane 36.81 32.56
HORVU5Hr1G063050.3 Barley plasma membrane 22.96 30.13
HORVU3Hr1G074930.2 Barley plasma membrane 30.13 28.46
HORVU3Hr1G067050.2 Barley plasma membrane 30.13 28.46
HORVU5Hr1G041210.4 Barley plasma membrane 35.99 28.41
HORVU1Hr1G069510.6 Barley plasma membrane 29.64 28.35
HORVU3Hr1G007120.2 Barley cytosol, peroxisome 34.69 27.24
HORVU6Hr1G094680.2 Barley plasma membrane 30.13 27.05
HORVU3Hr1G030090.5 Barley cytosol 31.11 27.02
HORVU2Hr1G113540.1 Barley plastid 24.27 24.51
Protein Annotations
Gene3D:1.10.510.10Gene3D:3.30.200.20Gene3D:3.80.10.10MapMan:50.2.7UniProt:A0A287ILY2GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU2Hr1G080770EnsemblPlants:HORVU2Hr1G080770.4
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfPFAM:PF00069PFAM:PF07714
ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF45InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domTMHMM:TMhelixUniParc:UPI000B48021DSEG:seg
Description
No Description!
Coordinates
chrchr2H:+:585449003..585451294
Molecular Weight (calculated)
65697.6 Da
IEP (calculated)
9.928
GRAVY (calculated)
-0.157
Length
614 amino acids
Sequence
(BLAST)
001: WTGVVCSGGR VTGLHLPGDG LRGSVPVGAL GGLTRLTVLS LRFNALSGPL PADLASCVKL RVINLQSNHF SGELPAAILS LPALTQLNLA ENRLSGRIPA
101: AIAKSGKLQL LFLEGNLFTH ELPDVDMPSL LSFNASFNDL TGEVPKGFGG MPATSFLGMT LCGKPLPPCR TPSSQPPSQP PTPAPEAVVA GNGGRRRRRH
201: LAGGAIAGIV IGCALGFLLI AAVLVLACGA LRRKPRRTYR SQDAVAAELA LHSKEAMSPN SYTPRVSDAR PPPPASMPLP VAPVSVGRKK LFFFGRVPRP
301: YDLEDLLRAS AEVLGKGTYG TTYKAALETA PAVAVKRLKE TSLPEREFRD KIAAIGGLDH PNVVPLQAYY FSKDERLMVY EFVATGSLSS MLHGQPWRRA
401: VTAELGFEEA DRAGLGARPG VHPRDGLQGG ARQHQVVQHP PRPVGGRARG RPRTGEPRRP AGAPSMRVAG YRAPEVVADP RRLSQKADVY SFGVLLLEML
501: TGKAPTNAVL HDEGVDLPRW ARSVVREEWT SEVFDTELLR HPGAEEEMVE MLRLAMDCTV PVPDQRPAMP EIVVRIEELA APGSASSMTR PGRSISVDEA
601: DDRPLKPAGS IRES
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.