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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU2Hr1G068780.1
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU3Hr1G094210.2
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G040970.1
HORVU5Hr1G044710.4
HORVU6Hr1G073560.1
HORVU7Hr1G081830.7

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 HORVU6Hr1G073560.1 AT3G17950.1 15618630
AT1G48480.1 HORVU2Hr1G068780.1 AT3G27210.1 15618630
AT1G48480.1 HORVU3Hr1G094210.2 AT3G27210.1 15618630
AT3G02880.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT3G02880.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT3G02880.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT3G02880.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT3G02880.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT3G02880.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT3G02880.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT3G02880.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT3G02880.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT3G02880.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT3G02880.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT3G02880.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
AT3G17840.1 HORVU6Hr1G073560.1 AT3G17950.1 15618630
AT3G17840.1 HORVU2Hr1G068780.1 AT3G27210.1 15618630
AT3G17840.1 HORVU3Hr1G094210.2 AT3G27210.1 15618630
AT3G17840.1 HORVU7Hr1G081830.7 AT3G51310.1 15618630
AT3G17840.1 HORVU5Hr1G040970.1 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G202900.1 Wheat plasma membrane 93.92 73.35
TraesCS5D01G210800.1 Wheat plasma membrane 92.75 72.99
TraesCS5A01G205500.1 Wheat plasma membrane 92.55 72.5
Os09t0400500-01 Rice plasma membrane 69.61 54.78
Zm00001d020403_P001 Maize plasma membrane 66.86 53.2
KXG35590 Sorghum plasma membrane 66.67 52.07
PGSC0003DMT400036789 Potato cytosol 31.76 50.47
HORVU7Hr1G043470.2 Barley plasma membrane 57.06 45.47
GSMUA_Achr3P02160_001 Banana plasma membrane 37.84 40.12
CDY67567 Canola plasma membrane 44.9 39.28
VIT_14s0006g01080.t01 Wine grape plasma membrane 45.69 36.46
Bra021277.1-P Field mustard plasma membrane 45.1 36.39
CDX95816 Canola plasma membrane 41.96 36.27
CDY61284 Canola plasma membrane 44.71 36.08
HORVU4Hr1G007550.1 Barley plasma membrane 46.86 35.78
KRH41871 Soybean endoplasmic reticulum 45.49 35.75
GSMUA_Achr2P21610_001 Banana plasma membrane 42.16 35.54
Solyc11g011020.1.1 Tomato nucleus 44.71 35.51
CDX92167 Canola plasma membrane 43.33 35.42
PGSC0003DMT400040459 Potato plasma membrane 44.71 35.24
GSMUA_Achr10P... Banana plasma membrane 39.61 35.07
KRH60559 Soybean endoplasmic reticulum 45.1 35.06
Bra022250.1-P Field mustard plasma membrane 43.14 34.87
AT3G17840.1 Thale cress plasma membrane 43.92 34.62
Solyc03g118510.2.1 Tomato nucleus 44.51 34.34
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 37.65 34.1
VIT_17s0000g02010.t01 Wine grape plasma membrane 44.9 34.08
Bra014140.1-P Field mustard plasma membrane 42.55 34.01
Solyc06g068910.2.1 Tomato plasma membrane 41.96 33.75
KRH72980 Soybean extracellular 40.39 33.66
CDY51524 Canola plasma membrane 40.78 33.55
CDY41827 Canola plasma membrane 42.55 33.54
KRH17350 Soybean extracellular 40.98 33.49
PGSC0003DMT400074103 Potato plasma membrane 42.55 33.49
Bra040609.1-P Field mustard plasma membrane 40.78 33.39
HORVU5Hr1G063050.3 Barley plasma membrane 30.59 33.33
AT1G48480.1 Thale cress plasma membrane 42.75 33.28
Bra021408.1-P Field mustard plasma membrane 39.61 33.17
CDX77309 Canola plasma membrane 41.76 32.97
CDY28719 Canola plasma membrane 39.02 32.95
KRH48661 Soybean nucleus 44.12 32.89
GSMUA_Achr7P11160_001 Banana plasma membrane 34.31 32.77
HORVU3Hr1G080740.1 Barley plasma membrane 40.59 32.75
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 39.02 32.41
Bra008611.1-P Field mustard plasma membrane 39.02 32.25
Bra023574.1-P Field mustard plasma membrane 38.63 32.14
CDX85498 Canola plasma membrane 38.63 32.14
HORVU2Hr1G017650.1 Barley plasma membrane 40.0 32.03
CDY49655 Canola plasma membrane 38.63 31.93
CDX69441 Canola plasma membrane 38.63 31.88
CDY38103 Canola plasma membrane 38.24 31.81
KRH39040 Soybean plasma membrane 40.59 31.65
AT3G02880.1 Thale cress plasma membrane 38.82 31.58
AT5G16590.1 Thale cress plasma membrane 38.43 31.36
HORVU4Hr1G050770.1 Barley plasma membrane 38.82 31.08
HORVU3Hr1G053300.1 Barley plasma membrane 40.0 30.45
HORVU5Hr1G007340.7 Barley plasma membrane 39.41 29.87
HORVU3Hr1G089490.3 Barley plasma membrane 39.8 29.25
HORVU4Hr1G066900.1 Barley plasma membrane 27.65 26.31
HORVU3Hr1G030090.5 Barley cytosol 36.27 26.17
HORVU2Hr1G113540.1 Barley plastid 31.18 26.15
HORVU3Hr1G007120.2 Barley cytosol, peroxisome 39.22 25.58
HORVU3Hr1G074930.2 Barley plasma membrane 31.76 24.92
HORVU3Hr1G067050.2 Barley plasma membrane 31.76 24.92
HORVU5Hr1G041210.4 Barley plasma membrane 37.65 24.68
HORVU1Hr1G069510.6 Barley plasma membrane 29.22 23.21
HORVU6Hr1G094680.2 Barley plasma membrane 30.78 22.95
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A287E0I8GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU0Hr1G012920EnsemblPlants:HORVU0Hr1G012920.2
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfPFAM:PF00069PFscan:PS50011
PANTHER:PTHR27008PANTHER:PTHR27008:SF14InterPro:Prot_kinase_domSUPFAM:SSF52058SUPFAM:SSF56112TMHMM:TMhelix
UniParc:UPI000B46AB80SEG:seg::::
Description
No Description!
Coordinates
chrchrUn:-:74576117..74577925
Molecular Weight (calculated)
53181.0 Da
IEP (calculated)
5.934
GRAVY (calculated)
-0.112
Length
510 amino acids
Sequence
(BLAST)
001: MGLXXXXXLS NNRFTGEVSP EFNKLPRLAT LYLENNALNG TLPADLHLPN LQLFNVSDNQ LNGPVPASLA GRPASAFGGT ALCGAPLSPC ANTAPPPPPP
101: SPLPLPPPAS PEDSKSGKLS TAAIAGIAAG AVAALLVVLA VIFFLLCFRR RKSNKADTST ETAAYGDEDA SPETVSVARA EKSGVKPPRS SKPAASDAKK
201: LVFVGGEPDV AYELESLLHA SAEVLGKGWL GTTYRATLEG GVAVVTVKRL REVPIPEKEF RGTVAALGAL RHESLVPLRS YFYSKEEKLI VYDFVSAKGL
301: SSLLHGAGSE RLDFTTRARI ALASARGIAF IHGAGAGSSH GNIKSSNILV NDARDGAYVA DYGLVQLVGA SVPLKRVTGY RAPEVTDPRR ASQEADVYSF
401: GVLLLELLTG KAPANSVPGS DGAADLPQWV GTVVQEEWTG EVFDAGIANE AHVEEEMVRL LQLGTECTER RPDRRPAMSE VAARIEDIVG SAQRKTDSDE
501: FHSVSGDRSA
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.