Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G139300.1 | Wheat | golgi, unclear | 95.76 | 95.76 |
| TraesCS5B01G131500.1 | Wheat | golgi | 95.34 | 95.34 |
| TraesCS5A01G134000.1 | Wheat | golgi | 95.34 | 95.34 |
| EES09256 | Sorghum | cytosol | 87.29 | 86.55 |
| Os11t0147800-01 | Rice | cytosol | 86.86 | 86.5 |
| Os12t0145100-01 | Rice | cytosol, plastid | 86.44 | 85.71 |
| Zm00001d023376_P002 | Maize | extracellular | 85.17 | 84.45 |
| KXG22952 | Sorghum | cytosol, plastid | 84.32 | 81.22 |
| GSMUA_Achr8P08600_001 | Banana | cytosol | 76.69 | 76.69 |
| GSMUA_Achr8P00370_001 | Banana | cytosol | 75.85 | 75.85 |
| Bra023707.1-P | Field mustard | cytosol | 51.69 | 72.62 |
| CDY02581 | Canola | cytosol | 70.34 | 70.94 |
| CDY47200 | Canola | cytosol | 70.34 | 70.94 |
| AT5G19140.1 | Thale cress | plastid | 70.34 | 70.94 |
| CDY13981 | Canola | cytosol | 70.76 | 70.76 |
| CDX92551 | Canola | cytosol | 70.76 | 70.76 |
| Bra002216.1-P | Field mustard | cytosol | 70.34 | 70.34 |
| CDY59022 | Canola | cytosol | 69.49 | 70.09 |
| CDX88900 | Canola | cytosol | 69.07 | 69.66 |
| KRH51038 | Soybean | plastid | 68.64 | 68.94 |
| KRH02111 | Soybean | cytosol | 68.22 | 68.22 |
| KRH20897 | Soybean | nucleus | 68.22 | 68.22 |
| Solyc01g079880.2.1 | Tomato | plastid | 67.37 | 67.37 |
| PGSC0003DMT400023208 | Potato | plastid | 66.53 | 66.53 |
| CDY59012 | Canola | cytosol | 68.64 | 64.03 |
| Solyc06g054370.1.1 | Tomato | cytosol, plastid | 52.97 | 61.27 |
| GSMUA_Achr11P... | Banana | cytosol | 56.36 | 57.58 |
| KRH11390 | Soybean | nucleus | 69.49 | 55.97 |
| VIT_05s0020g02770.t01 | Wine grape | cytosol, plastid | 63.56 | 55.35 |
| Zm00001d052493_P001 | Maize | plastid | 80.93 | 52.76 |
| KRH38367 | Soybean | extracellular | 25.42 | 49.59 |
| HORVU5Hr1G105840.4 | Barley | cytosol | 44.49 | 42.51 |
| HORVU5Hr1G094370.1 | Barley | cytosol, peroxisome, plastid | 44.92 | 42.23 |
| CDY32292 | Canola | plasma membrane | 30.51 | 32.58 |
| CDX80239 | Canola | vacuole | 30.93 | 31.47 |
| HORVU2Hr1G118550.2 | Barley | cytosol | 28.81 | 27.76 |
| HORVU2Hr1G118570.2 | Barley | cytosol | 14.41 | 12.55 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G040970.1 | EnsemblPlantsGene:HORVU5Hr1G040970 | Gene3D:3.60.20.10 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | InterPro:DUF3700 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF18 |
| PFAM:PF12481 | SEG:seg | SMART:SM01172 | SUPFAM:SSF56235 | UniParc:UPI000B47D637 | UniProt:A0A287QXL1 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:307678606..307682136
Molecular Weight (calculated)
25212.1 Da
IEP (calculated)
4.577
GRAVY (calculated)
0.158
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAVFSGEVV EVPAELVAAG SRTPSPKTRA SELVKRFLAG ADPAVSVELG SLGNLAYSHV KESLLLPRSF AAKDEIFCLF EGVLDNLGRL SQQYGLSKGS
101: NEVLLVIEAY KTLRDRAPYP ASFMLSQLAG SYAFVLFDKS TSSLFVASDP EGKVQLFWGI TADGCVAFSD DIDLLKGSCG KSLAPFPQGC FYWNALGGLK
201: SYENPKNKVT AVPADEEEIC GTTFMVEGST VLAALQ
101: NEVLLVIEAY KTLRDRAPYP ASFMLSQLAG SYAFVLFDKS TSSLFVASDP EGKVQLFWGI TADGCVAFSD DIDLLKGSCG KSLAPFPQGC FYWNALGGLK
201: SYENPKNKVT AVPADEEEIC GTTFMVEGST VLAALQ
001: MLGIFSGAIV SPPEELVAAG SRTPSPKTTG STLVNRFVEK NPSAVSVQVG DYVQLAYSHH NESPLRPRSF GAKDEIFCLF QGSLDNLGSL KQQYGLAKNA
101: NEVLLVIEAY KTLRDRAPYP ANHVVAHLSG DFAFVVFDKS TSTLFVASDQ VGKVPLYWGI TADGYVAFAD DVDLLKGACG KSLASFPQGC YYSTALGGLR
201: SFENPKNKIT AVPANEGEIW GATFKVEGAT VLAD
101: NEVLLVIEAY KTLRDRAPYP ANHVVAHLSG DFAFVVFDKS TSTLFVASDQ VGKVPLYWGI TADGYVAFAD DVDLLKGACG KSLASFPQGC YYSTALGGLR
201: SFENPKNKIT AVPANEGEIW GATFKVEGAT VLAD
Arabidopsis Description
ATAILP1Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q94BR2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.