Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G19140.1 | KRH39040 | AT3G17840.1 | 15618630 |
| AT5G19140.1 | KRH41871 | AT3G17840.1 | 15618630 |
| AT5G19140.1 | KRH48661 | AT3G17840.1 | 15618630 |
| AT5G19140.1 | KRH60559 | AT3G17840.1 | 15618630 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023707.1-P | Field mustard | cytosol | 51.24 | 36.9 |
| KRH20897 | Soybean | nucleus | 57.85 | 29.66 |
| KRH02111 | Soybean | cytosol | 56.2 | 28.81 |
| KRH51038 | Soybean | plastid | 55.37 | 28.51 |
| PGSC0003DMT400023208 | Potato | plastid | 54.55 | 27.97 |
| Solyc01g079880.2.1 | Tomato | plastid | 54.55 | 27.97 |
| CDY02581 | Canola | cytosol | 52.89 | 27.35 |
| CDY47200 | Canola | cytosol | 52.89 | 27.35 |
| AT5G19140.1 | Thale cress | plastid | 52.07 | 26.92 |
| CDX88900 | Canola | cytosol | 52.07 | 26.92 |
| CDY59022 | Canola | cytosol | 52.07 | 26.92 |
| Bra002216.1-P | Field mustard | cytosol | 52.07 | 26.69 |
| CDX92551 | Canola | cytosol | 52.07 | 26.69 |
| CDY13981 | Canola | cytosol | 52.07 | 26.69 |
| TraesCS5A01G134000.1 | Wheat | golgi | 50.41 | 25.85 |
| TraesCS5B01G131500.1 | Wheat | golgi | 50.41 | 25.85 |
| TraesCS5D01G139300.1 | Wheat | golgi, unclear | 50.41 | 25.85 |
| Os11t0147800-01 | Rice | cytosol | 50.41 | 25.74 |
| HORVU5Hr1G040970.1 | Barley | cytosol | 49.59 | 25.42 |
| EES09256 | Sorghum | cytosol | 49.59 | 25.21 |
| Os12t0145100-01 | Rice | cytosol, plastid | 49.59 | 25.21 |
| CDY59012 | Canola | cytosol | 52.07 | 24.9 |
| Zm00001d023376_P002 | Maize | extracellular | 48.76 | 24.79 |
| KRH11390 | Soybean | nucleus | 59.5 | 24.57 |
| KXG22952 | Sorghum | cytosol, plastid | 49.59 | 24.49 |
| GSMUA_Achr8P00370_001 | Banana | cytosol | 45.45 | 23.31 |
| Solyc06g054370.1.1 | Tomato | cytosol, plastid | 38.84 | 23.04 |
| VIT_05s0020g02770.t01 | Wine grape | cytosol, plastid | 50.41 | 22.51 |
| GSMUA_Achr8P08600_001 | Banana | cytosol | 43.8 | 22.46 |
| GSMUA_Achr11P... | Banana | cytosol | 37.19 | 19.48 |
| KRH26075 | Soybean | endoplasmic reticulum | 38.84 | 18.5 |
| KRH27213 | Soybean | endoplasmic reticulum | 38.02 | 18.11 |
| KRH22129 | Soybean | nucleus | 38.02 | 18.11 |
| Zm00001d052493_P001 | Maize | plastid | 47.93 | 16.02 |
| KRH35440 | Soybean | cytosol, nucleus | 31.41 | 15.2 |
| KRG91376 | Soybean | cytosol, nucleus | 31.41 | 15.2 |
| KRH21498 | Soybean | cytosol | 31.41 | 15.14 |
| KRH10823 | Soybean | cytosol | 30.58 | 14.74 |
| KRH10843 | Soybean | nucleus | 29.75 | 14.34 |
| KRH20474 | Soybean | nucleus | 28.1 | 13.23 |
| KRH10856 | Soybean | cytosol | 26.45 | 12.6 |
| KRH33539 | Soybean | cytosol | 15.7 | 11.8 |
| KRG89645 | Soybean | cytosol | 18.18 | 11.34 |
| KRH50016 | Soybean | cytosol, nucleus, plastid | 28.93 | 11.15 |
| KRH63496 | Soybean | cytosol | 17.36 | 10.94 |
| KRH21458 | Soybean | cytosol | 9.92 | 9.3 |
| CDY32292 | Canola | plasma membrane | 5.79 | 3.17 |
| CDX80239 | Canola | vacuole | 5.79 | 3.02 |
Protein Annotations
| EMBL:ACUP02005797 | EnsemblPlants:KRH38367 | EnsemblPlantsGene:GLYMA_09G131000 | InterPro:DUF3700 | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF18 |
| PFAM:PF12481 | ProteinID:KRH38367 | ProteinID:KRH38367.1 | SMART:SM01172 | UniParc:UPI0006EDEFCF | UniProt:A0A0R0IHL2 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:32639352..32640711
Molecular Weight (calculated)
13730.5 Da
IEP (calculated)
5.678
GRAVY (calculated)
-0.044
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSLLLIPVF PRLNQNILWT HNSNCQKLHN YKVPLYWGIA ADGYVAFADD ADLLKGSCGK SLASFPQGCF YFTEIGGLKC YENPKNKIIA VPAEEEEIWG
101: VFFKNILSIC LEQRIIDQSQ Q
101: VFFKNILSIC LEQRIIDQSQ Q
001: MHNTLSLAFT HIKHTNTFII ACLFKDLLLT DRSFGAKDEI FCLFQGSLDN LGSLKQQYGL AKNANEVLLV IEAYKTLRDR APYPANHVVA HLSGDFAFVV
101: FDKSTSTLFV ASDQVGKVPL YWGITADGYV AFADDVDLLK GACGKSLASF PQGCYYSTAL GGLRSFENPK NKITAVPANE GEIWGATFKV EGATVLAD
101: FDKSTSTLFV ASDQVGKVPL YWGITADGYV AFADDVDLLK GACGKSLASF PQGCYYSTAL GGLRSFENPK NKITAVPANE GEIWGATFKV EGATVLAD
Arabidopsis Description
ATAILP1Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q94BR2]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.