Factsheet for Solyc06g054370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g118510.2.1
Solyc06g068910.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19140.1	Solyc03g118510.2.1	AT3G17840.1	15618630
AT5G19140.1	Solyc06g068910.2.1	AT3G17840.1	15618630

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g079880.2.1	Tomato	plastid	78.43	67.8
Bra023707.1-P	Field mustard	cytosol	53.43	64.88
KRH20897	Soybean	nucleus	75.0	64.83
KRH02111	Soybean	cytosol	75.0	64.83
CDY02581	Canola	cytosol	74.02	64.53
CDY47200	Canola	cytosol	74.02	64.53
KRH51038	Soybean	plastid	74.02	64.26
CDX88900	Canola	cytosol	73.53	64.1
AT5G19140.1	Thale cress	plastid	73.53	64.1
CDY59022	Canola	cytosol	72.55	63.25
CDY13981	Canola	cytosol	72.55	62.71
CDX92551	Canola	cytosol	72.55	62.71
Bra002216.1-P	Field mustard	cytosol	72.06	62.29
VIT_05s0020g02770.t01	Wine grape	cytosol, plastid	78.43	59.04
CDY59012	Canola	cytosol	73.04	58.89
GSMUA_Achr8P08600_001	Banana	cytosol	63.24	54.66
GSMUA_Achr8P00370_001	Banana	cytosol	62.75	54.24
TraesCS5A01G134000.1	Wheat	golgi	61.76	53.39
HORVU5Hr1G040970.1	Barley	cytosol	61.27	52.97
TraesCS5D01G139300.1	Wheat	golgi, unclear	61.27	52.97
Os12t0145100-01	Rice	cytosol, plastid	61.76	52.94
TraesCS5B01G131500.1	Wheat	golgi	60.78	52.54
Os11t0147800-01	Rice	cytosol	60.78	52.32
KRH11390	Soybean	nucleus	74.51	51.88
EES09256	Sorghum	cytosol	59.31	50.84
Zm00001d023376_P002	Maize	extracellular	58.33	50.0
KXG22952	Sorghum	cytosol, plastid	59.31	49.39
GSMUA_Achr11P...	Banana	cytosol	46.57	41.13
KRH38367	Soybean	extracellular	23.04	38.84
Solyc09g082780.2.1	Tomato	nucleus	40.2	32.67
Zm00001d052493_P001	Maize	plastid	57.84	32.6
Solyc02g078380.2.1	Tomato	extracellular, nucleus	39.71	32.02
Solyc12g013700.1.1	Tomato	cytosol	38.24	30.71
Solyc03g006490.2.1	Tomato	cytosol	37.25	30.04
CDY32292	Canola	plasma membrane	32.35	29.86
CDX80239	Canola	vacuole	31.86	28.02
Solyc02g078500.2.1	Tomato	unclear	34.31	27.45

Protein Annotations

EnsemblPlants:Solyc06g054370.1.1	EnsemblPlantsGene:Solyc06g054370.1	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
PANTHER:PTHR11772	PANTHER:PTHR11772:SF18	PFAM:PF12481	SMART:SM01172	SUPFAM:SSF56235	UniParc:UPI0002765B73
UniProt:K4C6C3	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6:-:37163135..37166911

Molecular Weight (calculated)

22178.5 Da

IEP (calculated)

6.255

GRAVY (calculated)

0.064

Length

204 amino acids

Sequence
(BLAST)

001: MLGVFSSSIL PPPKELVAAG SQTPSPKMTG NALVNWFVKI ESSVVSVQIN DLVQLAYTHN NESALLPRDE IFCLFEGCVD NLGSLRQEYG LAKSANEVVL
101: MIESYKALRD RAPYPPSHVV SHLQGNFAFI VFDKSTSTLF VAIDKVGKIP LYWGITADGY VAFADDANLL KGACGKSLAS FPKGCFFSTA VGELRSYENS
201: QKKD

Best Arabidopsis Sequence Match ( AT5G19140.1 )
(BLAST)

001: MLGIFSGAIV SPPEELVAAG SRTPSPKTTG STLVNRFVEK NPSAVSVQVG DYVQLAYSHH NESPLRPRSF GAKDEIFCLF QGSLDNLGSL KQQYGLAKNA
101: NEVLLVIEAY KTLRDRAPYP ANHVVAHLSG DFAFVVFDKS TSTLFVASDQ VGKVPLYWGI TADGYVAFAD DVDLLKGACG KSLASFPQGC YYSTALGGLR
201: SFENPKNKIT AVPANEGEIW GATFKVEGAT VLAD

Arabidopsis Description

ATAILP1Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q94BR2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.