CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90996
EER95247
EES15012
KXG26481
KXG35590

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19140.1	EER90996	AT3G17840.1	15618630
AT5G19140.1	EER95247	AT3G17840.1	15618630
AT5G19140.1	EES15012	AT3G17840.1	15618630
AT5G19140.1	KXG26481	AT3G17840.1	15618630
AT5G19140.1	KXG35590	AT3G17840.1	15618630

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023376_P002	Maize	extracellular	90.2	92.86
Os11t0147800-01	Rice	cytosol	85.71	88.61
EES09256	Sorghum	cytosol	84.9	87.39
TraesCS5D01G139300.1	Wheat	golgi, unclear	83.67	86.86
Os12t0145100-01	Rice	cytosol, plastid	84.08	86.55
TraesCS5A01G134000.1	Wheat	golgi	83.27	86.44
TraesCS5B01G131500.1	Wheat	golgi	82.86	86.02
HORVU5Hr1G040970.1	Barley	cytosol	81.22	84.32
GSMUA_Achr8P08600_001	Banana	cytosol	74.69	77.54
GSMUA_Achr8P00370_001	Banana	cytosol	73.47	76.27
Bra023707.1-P	Field mustard	cytosol	48.57	70.83
AT5G19140.1	Thale cress	plastid	66.12	69.23
CDY13981	Canola	cytosol	65.31	67.8
CDX92551	Canola	cytosol	65.31	67.8
CDY47200	Canola	cytosol	64.49	67.52
CDY02581	Canola	cytosol	64.49	67.52
Bra002216.1-P	Field mustard	cytosol	64.9	67.37
CDY59022	Canola	cytosol	64.08	67.09
CDX88900	Canola	cytosol	64.08	67.09
KRH20897	Soybean	nucleus	63.67	66.1
KRH51038	Soybean	plastid	62.86	65.53
KRH02111	Soybean	cytosol	62.86	65.25
Solyc01g079880.2.1	Tomato	plastid	60.0	62.29
PGSC0003DMT400023208	Potato	plastid	60.0	62.29
CDY59012	Canola	cytosol	63.67	61.66
Solyc06g054370.1.1	Tomato	cytosol, plastid	49.39	59.31
GSMUA_Achr11P...	Banana	cytosol	53.88	57.14
VIT_05s0020g02770.t01	Wine grape	cytosol, plastid	60.0	54.24
KRH11390	Soybean	nucleus	64.08	53.58
KRH38367	Soybean	extracellular	24.49	49.59
EER93297	Sorghum	cytosol	44.08	43.37
KXG37583	Sorghum	plastid	43.27	41.41
EES13111	Sorghum	cytosol, plastid	40.82	38.02
CDY32292	Canola	plasma membrane	27.35	30.32
CDX80239	Canola	vacuole	27.76	29.31

Protein Annotations

EnsemblPlants:KXG22952	EnsemblPlantsGene:SORBI_3008G033200	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
PANTHER:PTHR11772	PANTHER:PTHR11772:SF18	PFAM:PF12481	ProteinID:KXG22952	ProteinID:KXG22952.1	SEG:seg
SMART:SM01172	SUPFAM:SSF56235	UniParc:UPI0001C807B9	UniProt:A0A1B6PB49	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr8:-:3017490..3020624

Molecular Weight (calculated)

26335.6 Da

IEP (calculated)

6.506

GRAVY (calculated)

0.060

Length

245 amino acids

Sequence
(BLAST)

001: MLAVFSGGVV EVPAELVAAG SRTPSPKTRA SELVGRFLGA SEPAVSVQLG DLGHLAYSHT NQALLRPRSF AAKDEVFCLF EGVLDNLGRL SQQHGLSTKG
101: ANEVLLVIEA YKTLRDRAPY PASFMLAQLT GSYAFVLFDK STNSLLVASD PEGKVPLFWG ITADGCVAFS DDIDMLKGSC GKSLAPFPQG CFYSNALGGL
201: KCYENPKHKV TAVPADEEEI CGATFKVKKK KWLLFLEDIN SSFSM

Best Arabidopsis Sequence Match ( AT5G19140.1 )
(BLAST)

001: MLGIFSGAIV SPPEELVAAG SRTPSPKTTG STLVNRFVEK NPSAVSVQVG DYVQLAYSHH NESPLRPRSF GAKDEIFCLF QGSLDNLGSL KQQYGLAKNA
101: NEVLLVIEAY KTLRDRAPYP ANHVVAHLSG DFAFVVFDKS TSTLFVASDQ VGKVPLYWGI TADGYVAFAD DVDLLKGACG KSLASFPQGC YYSTALGGLR
201: SFENPKNKIT AVPANEGEIW GATFKVEGAT VLAD

Arabidopsis Description

ATAILP1Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q94BR2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.