CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0744600-01	Rice	plasma membrane	87.11	88.84
TraesCS5A01G383200.1	Wheat	golgi, unclear	85.55	87.25
TraesCS5D01G392600.1	Wheat	peroxisome	85.55	86.9
HORVU5Hr1G094370.1	Barley	cytosol, peroxisome, plastid	84.77	86.45
TraesCS5B01G387700.1	Wheat	golgi	85.16	85.49
GSMUA_Achr1P14100_001	Banana	cytosol	67.19	69.35
GSMUA_Achr3P30980_001	Banana	plastid	66.02	68.42
KRH35440	Soybean	cytosol, nucleus	66.02	67.6
GSMUA_Achr2P08920_001	Banana	cytosol	64.84	67.21
VIT_05s0020g04160.t01	Wine grape	cytosol	64.84	66.67
KRG91376	Soybean	cytosol, nucleus	64.84	66.4
Zm00001d033983_P001	Maize	cytosol	96.88	66.31
PGSC0003DMT400077577	Potato	cytosol	64.84	66.14
Solyc09g082780.2.1	Tomato	nucleus	63.67	64.94
GSMUA_Achr4P07750_001	Banana	cytosol	62.11	64.37
EER93297	Sorghum	cytosol	61.72	63.45
Bra001889.1-P	Field mustard	cytosol	60.16	61.85
CDY61079	Canola	cytosol	59.77	61.45
CDX92962	Canola	cytosol	59.77	61.45
AT3G22850.1	Thale cress	cytosol	58.59	60.48
VIT_14s0036g00050.t01	Wine grape	cytosol, extracellular, peroxisome	52.73	60.27
AT5G43830.1	Thale cress	peroxisome, plastid	57.81	58.96
CDY50809	Canola	peroxisome	55.47	56.57
CDY32931	Canola	cytosol	54.69	55.78
Bra027506.1-P	Field mustard	cytosol	54.69	55.78
EES09256	Sorghum	cytosol	40.23	43.28
KXG22952	Sorghum	cytosol, plastid	41.41	43.27
EES13111	Sorghum	cytosol, plastid	44.14	42.97

Protein Annotations

EnsemblPlants:KXG37583	EnsemblPlantsGene:SORBI_3001G093900	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
PANTHER:PTHR11772	PANTHER:PTHR11772:SF8	PFAM:PF12481	ProteinID:KXG37583	ProteinID:KXG37583.1	SEG:seg
SMART:SM01172	SUPFAM:SSF56235	UniParc:UPI00022070A6	UniProt:A0A1B6QI34	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr1:+:7215324..7218478

Molecular Weight (calculated)

26912.7 Da

IEP (calculated)

6.504

GRAVY (calculated)

-0.055

Length

256 amino acids

Sequence
(BLAST)

001: MLAVFDPTVA KCPEGLRSPP VAGSAAAAAG GAGAGALMKG FSDSHDGAVT VSLGPSGALA YSAANQNPLV PRLFGAVNDI FCLFQGHIEN IANLKQHYGL
101: SKTANEVTIL IEAYRTLRDR GPVPASQVVR DLSGKFAFIL YDTLSKSTFV AADADGSIPF FWGVDSENHL VFSDDAGLLK TGCGNSYAPF PKGCFYTTSG
201: GLQSFEHPLH EVKAVPRVDS QGQMCGSTFK VDSESKKKQD ASIPRVGSAA DWSNQF

Best Arabidopsis Sequence Match ( AT3G22850.1 )
(BLAST)

001: MLAIFDKNVA KTPEALQGQE GGSVCALKDR FLPNHFSSVY PGAVTINLGS SGFIACSLEK QNPLLPRLFA VVDDMFCIFQ GHIENVPILK QQYGLTKTAT
101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY
201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI

Arabidopsis Description

Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.