Factsheet for TraesCS5B01G387700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G392600.1	Wheat	peroxisome	97.65	98.81
HORVU5Hr1G094370.1	Barley	cytosol, peroxisome, plastid	97.25	98.8
TraesCS5A01G383200.1	Wheat	golgi, unclear	96.86	98.41
Os03t0744600-01	Rice	plasma membrane	85.49	86.85
KXG37583	Sorghum	plastid	85.49	85.16
GSMUA_Achr3P30980_001	Banana	plastid	69.41	71.66
GSMUA_Achr1P14100_001	Banana	cytosol	69.02	70.97
GSMUA_Achr2P08920_001	Banana	cytosol	65.1	67.21
VIT_05s0020g04160.t01	Wine grape	cytosol	65.49	67.07
GSMUA_Achr4P07750_001	Banana	cytosol	63.92	65.99
PGSC0003DMT400077577	Potato	cytosol	64.71	65.74
KRH35440	Soybean	cytosol, nucleus	63.92	65.2
Solyc09g082780.2.1	Tomato	nucleus	63.53	64.54
KRG91376	Soybean	cytosol, nucleus	63.14	64.4
TraesCS5B01G441600.1	Wheat	cytosol	61.57	63.56
Bra001889.1-P	Field mustard	cytosol	61.57	63.05
CDY61079	Canola	cytosol	60.78	62.25
CDX92962	Canola	cytosol	60.78	62.25
VIT_14s0036g00050.t01	Wine grape	cytosol, extracellular, peroxisome	54.51	62.05
AT3G22850.1	Thale cress	cytosol	58.04	59.68
AT5G43830.1	Thale cress	peroxisome, plastid	58.43	59.36
Zm00001d033983_P001	Maize	cytosol	83.92	57.22
CDY50809	Canola	peroxisome	56.08	56.97
CDY32931	Canola	cytosol	55.29	56.18
Bra027506.1-P	Field mustard	cytosol	55.29	56.18
TraesCS5B01G131500.1	Wheat	golgi	41.57	44.92

Protein Annotations

EnsemblPlants:TraesCS5B01G387700.1	EnsemblPlantsGene:TraesCS5B01G387700	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
PANTHER:PTHR11772	PANTHER:PTHR11772:SF8	PFAM:PF12481	SEG:seg	SMART:SM01172	SUPFAM:SSF56235
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:566687241..566689683

Molecular Weight (calculated)

26711.4 Da

IEP (calculated)

5.620

GRAVY (calculated)

-0.083

Length

255 amino acids

Sequence
(BLAST)

001: MLAVFDQTVA KCPEGLRSPP AAGGGGTAAG GGGGAAALMK GFADANDAAV TVSLGAAGAL AYSSANKNPL VPRMFGSVND IFCLFQGHVE NIGNLKQHYG
101: LSKTANEVTI LIEAYRTLRD RGPLPASQVV RDLSGRFAFI LYDTVSKSTF VAADADGSIP FFWGVDSEDH LVFSDDNELL KAGCGNSFAP FPKGCFYTTS
201: GGLQSFEHPL NELKAVPRVD SQGQMCGSTF KVDSEAKKDS GIPRVGSAAD WSNHY

Best Arabidopsis Sequence Match ( AT5G43830.1 )
(BLAST)

001: MLAVFEKTVA NSPEALQSPH SSESAFALKD GSLATHFASV NPNSVTLNFG SSGFVAYSLD NPDPRVPRLF AVVDDIFCLF QGHIENLPFL KQQYGLNKIT
101: NEAIIVIEAY RTLRDRGPYP VDKVVRDFHG KFAFILFDSV KKTVFAAADA DGSVPFFWGT DAEGHLVFSD NTEMVKKGCA KSYGPFPKGC FFTSSGGLRS
201: FEHPKNELKP VPRVDSSGDV CGATFKVDAE TKREGTKMPR VDSSQNWAGH I

Arabidopsis Description

Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9FG81]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.