Factsheet for GSMUA_Achr2P08920_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P14100_001	Banana	cytosol	84.62	84.27
GSMUA_Achr3P30980_001	Banana	plastid	81.78	81.78
GSMUA_Achr4P07750_001	Banana	cytosol	73.28	73.28
PGSC0003DMT400077577	Potato	cytosol	71.26	70.12
Solyc09g082780.2.1	Tomato	nucleus	69.64	68.53
VIT_05s0020g04160.t01	Wine grape	cytosol	68.83	68.27
HORVU5Hr1G105840.4	Barley	cytosol	68.02	68.02
KRH35440	Soybean	cytosol, nucleus	68.83	68.0
KRG91376	Soybean	cytosol, nucleus	68.02	67.2
TraesCS5A01G383200.1	Wheat	golgi, unclear	68.02	66.93
TraesCS5A01G438800.1	Wheat	cytosol	66.8	66.8
Os03t0744600-01	Rice	plasma membrane	67.61	66.53
TraesCS5D01G445900.1	Wheat	cytosol	66.4	66.4
TraesCS5D01G392600.1	Wheat	peroxisome	67.61	66.27
HORVU5Hr1G094370.1	Barley	cytosol, peroxisome, plastid	67.21	66.14
TraesCS5B01G387700.1	Wheat	golgi	67.21	65.1
KXG37583	Sorghum	plastid	67.21	64.84
CDY61079	Canola	cytosol	65.18	64.66
Bra001889.1-P	Field mustard	cytosol	65.18	64.66
TraesCS5B01G441600.1	Wheat	cytosol	64.37	64.37
CDX92962	Canola	cytosol	64.78	64.26
AT3G22850.1	Thale cress	cytosol	64.37	64.11
EER93297	Sorghum	cytosol	63.97	63.45
VIT_14s0036g00050.t01	Wine grape	cytosol, extracellular, peroxisome	57.49	63.39
AT5G43830.1	Thale cress	peroxisome, plastid	63.16	62.15
CDY50809	Canola	peroxisome	60.73	59.76
CDY32931	Canola	cytosol	60.32	59.36
Bra027506.1-P	Field mustard	cytosol	60.32	59.36
GSMUA_Achr8P00370_001	Banana	cytosol	43.72	45.76
GSMUA_Achr8P08600_001	Banana	cytosol	42.51	44.49
Zm00001d033983_P001	Maize	cytosol	66.8	44.12
GSMUA_Achr10P...	Banana	cytosol	44.53	42.8
GSMUA_Achr10P...	Banana	cytosol	45.34	42.11
GSMUA_Achr3P14300_001	Banana	cytosol	44.53	41.51
GSMUA_AchrUn_...	Banana	cytosol	38.06	38.84
GSMUA_Achr11P...	Banana	cytosol	34.82	37.23

Protein Annotations

EnsemblPlants:GSMUA_Achr2P08920_001	EnsemblPlants:GSMUA_Achr2T08920_001	EnsemblPlantsGene:GSMUA_Achr2G08920_001	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	PANTHER:PTHR11772	PANTHER:PTHR11772:SF8	PFAM:PF12481	SMART:SM01172	SUPFAM:SSF56235
UniParc:UPI000296892A	UniProt:M0S6D3	MapMan:35.1	:	:	:

Description

Putative Stem-specific protein TSJT1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G08920_001]

Coordinates

chr2:+:12778361..12782540

Molecular Weight (calculated)

26552.7 Da

IEP (calculated)

7.875

GRAVY (calculated)

-0.126

Length

247 amino acids

Sequence
(BLAST)

001: MLAVFDRKVA KCPEGLRSPG AEGGDGGRSM LDHFLAARAG AVAINLGSSG GLAYTSKKQT PLLPRLFAVV DDIFCLFQGH IQNITSLKQQ YGLGKTANEV
101: IIVIEAYKTL RDRGPFPASQ VLRDLNGKFA FILFDSSSNT TFMASDADGS VPFFWGADAQ DHLVLSDDAD IVKKGCGKSF APFPKGCFFT TSGGLQSFEH
201: PMNELKPMPR VDSQGQVCGA TYNVDYMAKK DAGMPRVGSS ANWSSQF

Best Arabidopsis Sequence Match ( AT3G22850.1 )
(BLAST)

001: MLAIFDKNVA KTPEALQGQE GGSVCALKDR FLPNHFSSVY PGAVTINLGS SGFIACSLEK QNPLLPRLFA VVDDMFCIFQ GHIENVPILK QQYGLTKTAT
101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY
201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI

Arabidopsis Description

Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.