CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G105840.4	Barley	cytosol	77.11	77.73
TraesCS5A01G438800.1	Wheat	cytosol	77.11	77.73
TraesCS5D01G445900.1	Wheat	cytosol	76.71	77.33
TraesCS5B01G441600.1	Wheat	cytosol	75.5	76.11
GSMUA_Achr1P14100_001	Banana	cytosol	65.46	65.73
KRH35440	Soybean	cytosol, nucleus	65.46	65.2
GSMUA_Achr3P30980_001	Banana	plastid	64.66	65.18
KRG91376	Soybean	cytosol, nucleus	64.66	64.4
PGSC0003DMT400077577	Potato	cytosol	64.66	64.14
Solyc09g082780.2.1	Tomato	nucleus	64.66	64.14
GSMUA_Achr2P08920_001	Banana	cytosol	63.45	63.97
VIT_05s0020g04160.t01	Wine grape	cytosol	63.05	63.05
AT3G22850.1	Thale cress	cytosol	62.25	62.5
KXG37583	Sorghum	plastid	63.45	61.72
GSMUA_Achr4P07750_001	Banana	cytosol	59.84	60.32
Bra001889.1-P	Field mustard	cytosol	60.24	60.24
CDX92962	Canola	cytosol	59.84	59.84
CDY61079	Canola	cytosol	59.44	59.44
AT5G43830.1	Thale cress	peroxisome, plastid	57.43	56.97
CDY50809	Canola	peroxisome	56.22	55.78
CDY32931	Canola	cytosol	56.22	55.78
Bra027506.1-P	Field mustard	cytosol	56.22	55.78
VIT_14s0036g00050.t01	Wine grape	cytosol, extracellular, peroxisome	49.8	55.36
EES09256	Sorghum	cytosol	42.97	44.96
EES13111	Sorghum	cytosol, plastid	47.39	44.87
KXG22952	Sorghum	cytosol, plastid	43.37	44.08

Protein Annotations

EnsemblPlants:EER93297	EnsemblPlantsGene:SORBI_3001G057600	EntrezGene:8061173	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	PANTHER:PTHR11772	PANTHER:PTHR11772:SF36	PFAM:PF12481	ProteinID:EER93297	ProteinID:EER93297.1
RefSeq:XP_002466299.1	SMART:SM01172	SUPFAM:SSF56235	unigene:Sbi.558	UniParc:UPI0001A82B50	UniProt:C5WX77
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:4362628..4365435

Molecular Weight (calculated)

26774.6 Da

IEP (calculated)

7.086

GRAVY (calculated)

-0.212

Length

249 amino acids

Sequence
(BLAST)

001: MLAVFDRSVA PSPEGLRQPG AAGGDSAACL ADRFREARPD AVTVNLGGSG AMAYSSSKQS PLLPRLFGAV DNIFCMFQGT IANFAVLKQQ YGLSKGTNEV
101: NIIIEAYRTL RDRGPYPADQ VVRDISGKFA FVLYDCTTKS VFMATDPDGN VPFYWGADTD GRLVVSDDID LVKKACGKSS APFPKGFFFT TSGGLKSYEH
201: PMNEVKPVPW VDSKGEVCGT TYTVDASAKK ETKTSIPRVG SAADWSSQY

Best Arabidopsis Sequence Match ( AT3G22850.1 )
(BLAST)

001: MLAIFDKNVA KTPEALQGQE GGSVCALKDR FLPNHFSSVY PGAVTINLGS SGFIACSLEK QNPLLPRLFA VVDDMFCIFQ GHIENVPILK QQYGLTKTAT
101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY
201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI

Arabidopsis Description

Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.