Factsheet for VIT_05s0020g04160.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0036g00050.t01	Wine grape	cytosol, extracellular, peroxisome	74.3	82.59
PGSC0003DMT400077577	Potato	cytosol	77.51	76.89
KRH35440	Soybean	cytosol, nucleus	75.5	75.2
Solyc09g082780.2.1	Tomato	nucleus	75.5	74.9
KRG91376	Soybean	cytosol, nucleus	74.3	74.0
Bra001889.1-P	Field mustard	cytosol	73.09	73.09
CDX92962	Canola	cytosol	72.69	72.69
GSMUA_Achr3P30980_001	Banana	plastid	71.89	72.47
CDY61079	Canola	cytosol	72.29	72.29
AT3G22850.1	Thale cress	cytosol	70.68	70.97
GSMUA_Achr1P14100_001	Banana	cytosol	70.68	70.97
AT5G43830.1	Thale cress	peroxisome, plastid	69.88	69.32
GSMUA_Achr2P08920_001	Banana	cytosol	68.27	68.83
GSMUA_Achr4P07750_001	Banana	cytosol	66.67	67.21
TraesCS5D01G445900.1	Wheat	cytosol	66.67	67.21
HORVU5Hr1G094370.1	Barley	cytosol, peroxisome, plastid	67.47	66.93
HORVU5Hr1G105840.4	Barley	cytosol	66.27	66.8
TraesCS5A01G438800.1	Wheat	cytosol	66.27	66.8
TraesCS5A01G383200.1	Wheat	golgi, unclear	67.07	66.53
TraesCS5D01G392600.1	Wheat	peroxisome	66.67	65.87
Os03t0744600-01	Rice	plasma membrane	66.27	65.74
TraesCS5B01G441600.1	Wheat	cytosol	65.06	65.59
TraesCS5B01G387700.1	Wheat	golgi	67.07	65.49
KXG37583	Sorghum	plastid	66.67	64.84
CDY50809	Canola	peroxisome	65.06	64.54
CDY32931	Canola	cytosol	64.66	64.14
Bra027506.1-P	Field mustard	cytosol	64.66	64.14
EER93297	Sorghum	cytosol	63.05	63.05
VIT_19s0014g03130.t01	Wine grape	cytosol	50.2	49.02
VIT_00s0586g00030.t01	Wine grape	cytosol	49.0	47.66
VIT_10s0597g00010.t01	Wine grape	cytosol	27.71	45.7
VIT_00s0561g00020.t01	Wine grape	cytosol	48.59	45.49
Zm00001d033983_P001	Maize	cytosol	65.06	43.32
VIT_05s0020g02770.t01	Wine grape	cytosol, plastid	41.77	38.38

Protein Annotations

EntrezGene:100242660	wikigene:100242660	Gene3D:3.60.20.10	MapMan:35.1	EMBL:AM439431	ProteinID:CAN71784
ProteinID:CAN71784.1	ProteinID:CBI26316	ProteinID:CBI26316.3	UniProt:D7T745	InterPro:DUF3700	EMBL:FN595749
InterPro:IPR029055	EntrezGene:LOC100242660	wikigene:LOC100242660	InterPro:Ntn_hydrolases_N	PFAM:PF12481	PANTHER:PTHR11772
PANTHER:PTHR11772:SF8	SMART:SM01172	SUPFAM:SSF56235	TIGR:TC58487	UniParc:UPI00015C7AF0	ArrayExpress:VIT_05s0020g04160
EnsemblPlantsGene:VIT_05s0020g04160	EnsemblPlants:VIT_05s0020g04160.t01	unigene:Vvi.2577	RefSeq:XP_002283483	RefSeq:XP_002283483.1	:

Description

No Description!

Coordinates

chr5:+:5807982..5812074

Molecular Weight (calculated)

27160.1 Da

IEP (calculated)

5.589

GRAVY (calculated)

-0.103

Length

249 amino acids

Sequence
(BLAST)

001: MLAVFHKSIA EAPEGLRTPD SASLPALKDG FLPQFFASLH PSAVTVNLGS SGAISYSVDK QNPLLPRLFA VVDDIFCLFQ GHIENVALLK QQYGLNKTAN
101: EVIIVIEAYR TLRDRGPYPA DQVVRDLHGK FAFVLYDSSN RTAFLAADAD ESVPFFWGVD SEGHLVLSDD EETVKKGCGI SFAPFPKGCF FTTSGGLRSF
201: EHPLNELRAE PRVDSSGQVC GANFKVDVEA KKETGMPRVG SAANWSTHY

Best Arabidopsis Sequence Match ( AT3G22850.1 )
(BLAST)

001: MLAIFDKNVA KTPEALQGQE GGSVCALKDR FLPNHFSSVY PGAVTINLGS SGFIACSLEK QNPLLPRLFA VVDDMFCIFQ GHIENVPILK QQYGLTKTAT
101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY
201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI

Arabidopsis Description

Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.