Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0561g00020.t01 | Wine grape | cytosol | 98.44 | 94.74 |
| VIT_19s0014g03130.t01 | Wine grape | cytosol | 71.88 | 72.16 |
| KRH21498 | Soybean | cytosol | 66.02 | 67.33 |
| KRH10823 | Soybean | cytosol | 66.02 | 67.33 |
| PGSC0003DMT400033379 | Potato | cytosol | 64.84 | 65.61 |
| Solyc02g078500.2.1 | Tomato | unclear | 65.23 | 65.49 |
| PGSC0003DMT400057793 | Potato | cytosol | 65.23 | 65.49 |
| KRH10843 | Soybean | nucleus | 64.06 | 65.34 |
| Solyc03g006490.2.1 | Tomato | cytosol | 64.45 | 65.22 |
| Bra019002.1-P | Field mustard | cytosol | 63.28 | 64.03 |
| KRH20474 | Soybean | nucleus | 64.06 | 63.81 |
| CDY26025 | Canola | cytosol | 62.89 | 63.64 |
| CDY53810 | Canola | cytosol | 62.5 | 63.24 |
| AT3G15450.1 | Thale cress | cytosol | 62.5 | 63.24 |
| CDY56826 | Canola | cytosol | 62.11 | 62.85 |
| Bra021110.1-P | Field mustard | cytosol | 61.72 | 62.45 |
| Bra027243.1-P | Field mustard | cytosol | 61.72 | 62.45 |
| CDX97669 | Canola | cytosol | 61.72 | 62.45 |
| CDY20112 | Canola | cytosol | 61.33 | 62.06 |
| Os04t0679400-01 | Rice | cytosol | 61.72 | 61.24 |
| Zm00001d026632_P001 | Maize | extracellular | 62.11 | 60.0 |
| EES13111 | Sorghum | cytosol, plastid | 61.33 | 59.7 |
| CDY21841 | Canola | plastid | 46.48 | 59.2 |
| KRH33539 | Soybean | cytosol | 37.11 | 59.01 |
| TraesCS2A01G586500.1 | Wheat | cytosol | 60.55 | 58.71 |
| TraesCSU01G021600.1 | Wheat | cytosol | 60.16 | 58.33 |
| TraesCS2D01G600100.1 | Wheat | cytosol | 60.16 | 58.33 |
| CDY61102 | Canola | cytosol | 18.75 | 57.83 |
| CDX71441 | Canola | cytosol, mitochondrion, plastid, vacuole | 20.31 | 57.78 |
| GSMUA_Achr10P... | Banana | cytosol | 59.77 | 57.52 |
| KRH63496 | Soybean | cytosol | 42.58 | 56.77 |
| GSMUA_Achr3P14300_001 | Banana | cytosol | 58.59 | 56.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.34 | 55.37 |
| CDY07847 | Canola | cytosol | 18.36 | 55.29 |
| CDY21375 | Canola | cytosol | 16.41 | 54.55 |
| KRH50016 | Soybean | cytosol, nucleus, plastid | 64.06 | 52.23 |
| KRG89645 | Soybean | cytosol | 39.45 | 52.06 |
| Bra037807.1-P | Field mustard | cytosol | 19.92 | 51.0 |
| VIT_05s0020g04160.t01 | Wine grape | cytosol | 47.66 | 49.0 |
| VIT_14s0036g00050.t01 | Wine grape | cytosol, extracellular, peroxisome | 42.19 | 48.21 |
| VIT_10s0597g00010.t01 | Wine grape | cytosol | 28.12 | 47.68 |
| HORVU2Hr1G118550.2 | Barley | cytosol | 35.94 | 37.55 |
| VIT_05s0020g02770.t01 | Wine grape | cytosol, plastid | 35.55 | 33.58 |
| HORVU2Hr1G118570.2 | Barley | cytosol | 25.39 | 23.99 |
Protein Annotations
| EntrezGene:100854489 | wikigene:100854489 | MapMan:35.1 | ProteinID:CBI41052 | ProteinID:CBI41052.3 | UniProt:D7UE87 |
| InterPro:DUF3700 | EMBL:FN596798 | InterPro:IPR029055 | EntrezGene:LOC100854489 | wikigene:LOC100854489 | InterPro:Ntn_hydrolases_N |
| PFAM:PF12481 | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF15 | SMART:SM01172 | SUPFAM:SSF56235 | UniParc:UPI0001BE561F |
| ArrayExpress:VIT_00s0586g00030 | EnsemblPlantsGene:VIT_00s0586g00030 | EnsemblPlants:VIT_00s0586g00030.t01 | RefSeq:XP_003635423 | RefSeq:XP_003635423.1 | SEG:seg |
Description
No Description!
Coordinates
chrUn:-:32400893..32402501
Molecular Weight (calculated)
28035.7 Da
IEP (calculated)
6.234
GRAVY (calculated)
-0.040
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAIFNKGLV EPPQELNSPA SVKVSVKPKV PEETLKDFQS CHSTNAFLIS LGDAALLSYI PPCPPYSTQH RFFCGLDDIY CIFLGTLNNL CSLIRQYGLS
101: KGTNEAMLVI EAYRTLRDRG PYPADQVLKD MDGSFGFVLF DSKAGTVFAA LGADEGVKMY WGIGGDGWLV ISDNLEVIKA SCAKSFAPFP TGCMFHSEGG
201: LRSFEHPMNK MKAMPRIDSE GVMCGANFKV DDYSRIHSMP RVGSEANWAV WGGPHV
101: KGTNEAMLVI EAYRTLRDRG PYPADQVLKD MDGSFGFVLF DSKAGTVFAA LGADEGVKMY WGIGGDGWLV ISDNLEVIKA SCAKSFAPFP TGCMFHSEGG
201: LRSFEHPMNK MKAMPRIDSE GVMCGANFKV DDYSRIHSMP RVGSEANWAV WGGPHV
001: MLAIFHEAFA HPPEELNSPA SEKCSKQPKL PEETLNDFLL RYPLNTFSMS FGQAAVLAYV RPSASFSIHQ RLFCGFDDIY CLFFGSLNNL CQLNKQYGLT
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL
Arabidopsis Description
AT4g27450/F27G19_50 [Source:UniProtKB/TrEMBL;Acc:Q93V62]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.